Phaeobacter piscinae: PhaeoP14_03245
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Entry
PhaeoP14_03245 CDS
T05105
Name
(GenBank) putative spermidine/putrescine transport system extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppic
Phaeobacter piscinae
Pathway
ppic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PhaeoP14_03245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppic02000
]
PhaeoP14_03245
Transporters [BR:
ppic02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PhaeoP14_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ATG41282
LinkDB
All DBs
Position
complement(3389718..3390824)
Genome browser
AA seq
368 aa
AA seq
DB search
MKLTKLTALAATTALCAPMAMAADMANEMTIVSWGGAYQESQLKAYVEPYQEMHPDLKVI
WDESSAEATAKMRAMTEAGNVTWDLVDVVASDAMRMCDEGLAAELDHDEVLATAPDGTPA
SEDFGELIVSDCFVPQIVYSTTFGYRMDKVGDTPPSSICDIFDTAKYPGKRALQKRPIDN
VEWALYCDGVAKDEIYDVLSTDEGVERALAKLDSIKDQVVWWTAGAETPQLLADGEVVMG
STFNGRLFSAIAEQNQPIDMLWDMQSFDLDGWIVPADLPEDRKARVMDFLKFATDTQRLA
DQAKFISYGPARASSAPLVGKHAVLGIDMAPHMPTDPANAGNVHVYDYEWWADNRDDLDA
KFQAWLAK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccaaactgactgccctggcggccaccacggcgttgtgtgcgccgatggca
atggctgccgatatggccaacgaaatgaccatcgtgtcctggggcggcgcctatcaggaa
agccagctgaaggcatatgtcgaaccctatcaggagatgcaccctgatctgaaagtgatc
tgggacgaaagctcggctgaagcgaccgcaaaaatgcgcgcgatgaccgaagcgggcaat
gtgacctgggatctggtcgatgtggttgcctccgacgccatgcgtatgtgcgacgaaggt
ctggccgctgagctggatcacgacgaagtgctggctacggcgcccgatggcacccccgca
agcgaagacttcggcgagctgatcgtcagcgactgcttcgtaccgcagatcgtgtattcg
accaccttcggctaccgcatggacaaagtgggtgacaccccgccgtcctccatctgcgat
atctttgacactgcaaaatatccgggcaagcgcgccctgcagaagcgtccgatcgacaac
gttgaatgggctctgtattgcgatggcgttgccaaggacgagatttatgatgtgctgagc
accgatgagggtgtggagcgcgcgctggctaagctggacagcatcaaggatcaggttgtc
tggtggactgctggtgcagaaacgccccagctgctggccgacggtgaagttgtgatgggc
tcgacctttaacggtcgtctgttctccgcaatcgccgagcagaaccagccaatcgacatg
ctgtgggacatgcagtcctttgacctcgacggttggatcgtgcctgctgacctgcccgaa
gatcgcaaggctcgcgtgatggacttcctgaagttcgccaccgacacccagcgtctggcc
gatcaggcgaaattcatctcctatggtccggctcgtgcatcgtcggcaccgctggttggg
aagcacgccgttctgggtatcgatatggcgccgcacatgccgaccgatccggcaaatgcc
ggcaacgtgcatgtctatgactacgaatggtgggccgataaccgcgatgatctggacgca
aaattccaggcttggctggccaagtaa
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integrated database retrieval system
