KEGG   Phaeobacter piscinae: PhaeoP14_03259
Entry
PhaeoP14_03259    CDS       T05105                                 
Symbol
alkB
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
ppic  Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:ppic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppic03400]
    PhaeoP14_03259 (alkB)
Enzymes [BR:ppic01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     PhaeoP14_03259 (alkB)
DNA repair and recombination proteins [BR:ppic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    PhaeoP14_03259 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 DUF6558_C VacA2
Other DBs
NCBI-ProteinID: ATG41296
LinkDB
Position
complement(3404478..3405167)
AA seq 229 aa
MPPATARSRPVSRITAVFDRGVVKNGLTVMMKLRLRGFELTKPLLDMDGQQRLIECLRPV
LRAAPLFSPEVPGGGKMSVRMTSAGAYGWVSDRDGYRYEERHPAGQRWPEIPTEILDIWH
ATTGLERRPDCCLINYYGEGARMGLHQDKDEADFTYPVVSISLGDDGLLRIGNQTRGGKT
DTVWLNSGDVVVMGGDARLTYHGVDRIRFKSSRLLPKGGRINLTLRVVT
NT seq 690 nt   +upstreamnt  +downstreamnt
atgccccctgcaaccgccagatcgcgtcctgtttcgcgaattacagcggtttttgacagg
ggagtggttaagaacgggctaacagtgatgatgaagttgcgattgcgggggtttgagctg
acaaaaccccttctggatatggacgggcagcagcggctgattgagtgcctgcgcccggtt
ctgcgcgccgcaccgctgttttcgcccgaggtgcccggtggcggtaagatgtctgtgcgg
atgacgtcagccggggcctatggctgggtcagtgaccgggacgggtaccggtatgaagag
cgccatccggccgggcagcgctggcctgagatcccaacagagattctggacatctggcat
gcgaccaccggtttagagcggcgccctgattgttgtctgatcaactattatggcgaaggg
gcacggatgggcttgcatcaggacaaggacgaggccgatttcacctatccggtggtgtca
atctctcttggggacgacggtctgctgcggattggcaatcaaacgcgcggtggcaaaacc
gacaccgtctggctgaattcgggcgatgtggtcgtgatgggcggggatgcccggctgact
tatcacggggtggaccgtattcggttcaaatcctcacgtctgctgccaaaaggggggcgg
atcaatctgaccctgcgcgtggtgacctga

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