Phaeobacter piscinae: PhaeoP14_03309
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Entry
PhaeoP14_03309 CDS
T05105
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PhaeoP14_03309 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_03309 (mutS)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PhaeoP14_03309 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MutS_C
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ATG41346
LinkDB
All DBs
Position
3457443..3460076
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AA seq
877 aa
AA seq
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MSTVTPMMAQYLDIKAQYPDALLFYRMGDFYEMFFDDAVNAAEALDIALTKRGKHDGNDI
PMCGVPVHAAEGYLLTLIRKGFRVAVGEQLESPAEAKKRGSKSVVKRDVVRLVTPGTITE
DSLLEARRHNFLTAYCELRDQSALAWADISTGAFHVMPVASVRVSPELARLAPSELIVPD
GPALDQLRAIAEDHQIPVTPLAKSSFDSTAAEKRICDLFKVSTLESYGSFNRAEISAMGA
VIDYLDITQKGKLPLLQPPQQEAEDRVVQIDAATRRSLELTRSLTGGRSGSLLAVVDRTV
TPAGGRLLEQRLSSPSRNLDVIRSRLTALDFVVEQTQLAQSLRAALRKTPDLDRALSRLA
LDRGGPRDLAAVRNTLIQSEAISDLCDRADMPPLLQQALSGLTGFDDLLPLLDAALIAEP
PLLARDGGFIAEGYDSELDEARTLRDEGRSVIAALQKKYSDHTGINSLKIKHNNVLGYFI
ETTATHAEKMLSAPLSETYIHRQTTANQVRFTTVELSEIEARILNAGNLALEIEKRLYTR
LSDAILANAALLNAAARGLAELDLVTALADLALGENWSCPTVDTSREFSISGGRHPVVEQ
ALRQQGGSSFVANDCDLTADTGAAIWLLTGPNMAGKSTFLRQNALIAILAQMGSYVPADS
AHIGLISQLFSRVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYDG
LSIAWATLEHLHEVNRARALFATHYHELTQLAGKLPGVDNATVSVKEWEGEVIFLHEVKK
GAADRSYGVQVAQLAGLPGSVVARARDVLDMLEEGSRSGAGKIQIDDLPLFAAAPPPQPA
APVGPSPVEMLLDDIHPDDLSPREALEALYRLKEAAS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacagtcacgccgatgatggcccaatacctcgacatcaaggcgcagtacccggat
gccctcttgttctaccgcatgggcgatttctacgagatgttctttgacgatgccgtcaac
gcggcagaggccctcgacatcgcactgaccaaacgcggcaaacacgatggcaacgacatt
ccgatgtgtggtgtcccggttcatgccgccgagggctatttgctgacattgatccgaaag
gggtttcgtgtcgccgttggcgaacaattggaaagccctgcagaggccaagaaacgtggc
tccaaatcggttgtgaaacgggatgtggtgcggctggtcacccccggcaccatcaccgaa
gactccctgctggaggcgcgccgtcacaatttcctcaccgcctattgcgagctacgcgac
cagtccgccctcgcttgggcagatatctccacgggcgcgttccatgtgatgcccgtcgca
tccgtccgggtgtcccctgaactggcccggctggcgccatcggagttgattgtccccgat
ggccctgccttggaccagctgcgcgccattgcagaggaccatcagatcccggtgacccct
ctggcgaaatccagcttcgacagcaccgccgctgaaaaacgcatctgtgatctcttcaaa
gtctcaacactggaatcttacggctctttcaaccgagcagagatttcggccatgggcgcg
gtcatcgactatctcgacatcacacaaaagggtaagctgccactgcttcagcccccgcag
caggaggccgaggacagggttgtgcagatcgacgctgcgactcgtcgtagcctagaactc
acccgctcattgactggcgggcgcagcggctcactgcttgcggtggtggatcgcaccgta
acccccgccgggggtcggcttcttgaacaacggctgtccagcccatcgcgcaacctcgat
gtgatccgatcccggttgacggcgctggacttcgtggtggagcaaacgcaactcgcgcaa
tctctgcgcgctgctctgcgcaagacacccgatctggaccgggcgctgtcccggcttgcc
ctggatcgcggcggcccacgggatctcgctgcggtacgcaacacgctgatccagtctgag
gctatttcggacctctgcgacagggcagatatgccgccacttctacaacaggcgctctcc
gggctcaccggatttgacgatctgttacccctgcttgatgccgcgttgattgcagagccc
cccctcttggctcgcgacggcgggtttattgcagagggctacgacagcgagctggacgag
gcccgcacactgcgtgatgaaggtcgctccgtcattgcagcgctgcaaaagaaatactcc
gatcacacgggcatcaattcgctgaaaatcaagcacaacaatgtgctcggctacttcatc
gagaccaccgcgacccatgcagagaaaatgctctccgcccccctatcggagacctatatt
caccgccagacgacagccaatcaggttcggttcacaacggtggaactgagcgaaatcgag
gcccgtattctgaatgccggcaatctggcactggagattgaaaagcggctctatacaagg
ctatcagacgctattctggcaaatgcggccttgctgaatgcagcagcgcggggactggca
gaacttgacctggtcaccgccttggccgatctcgctctaggcgaaaactggtcctgtcca
acggtagacacctcgcgcgagttcagtatttcaggggggcgacaccccgttgtggaacag
gcactgcggcaacagggtggcagcagcttcgttgccaacgactgcgatctaaccgccgat
acaggggctgccatctggctgctgacaggtccgaacatggccggtaaatcaacctttctg
cgccagaatgccctgattgccatcctcgcccaaatggggagctacgtcccagcggacagc
gcccatatcggactgattagccagttgttcagccgggttggtgcctcggacgatctggca
cgcgggcgctcgaccttcatggttgagatggttgaaaccgcggccatcctcaatcaggca
gatgatcgcgcactggtcattctcgacgaaattgggcgcggtactgcgacctatgacggg
ctgtcgatcgcctgggccacgctggaacatctgcatgaggtcaatcgcgcccgcgcgctg
tttgcgacccattaccacgaactcacccagctcgccggcaagctgcccggcgtcgataat
gccaccgtttcggtcaaggaatgggaaggcgaagtcatctttctgcacgaggttaagaaa
ggcgccgcagatcggtcctacggggtacaggtcgcgcagcttgccggcctgcccggatcg
gttgttgcacgggctcgggacgttctggacatgctggaagagggcagccgcagtggcgcc
ggcaaaatccagatcgacgatcttcccctcttcgctgccgccccaccgccgcaaccagca
gcaccggtcggcccctcaccagtcgaaatgcttctggacgacatccaccctgatgatctc
tcaccacgggaagcactggaagcgctttatcgtctgaaagaagccgcgagctga
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