Phaeobacter piscinae: PhaeoP14_03326
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Entry
PhaeoP14_03326 CDS
T05105
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03030
DNA replication
ppic03430
Mismatch repair
ppic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP14_03326 (dnaQ)
03430 Mismatch repair
PhaeoP14_03326 (dnaQ)
03440 Homologous recombination
PhaeoP14_03326 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_03326 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_03326 (dnaQ)
Enzymes [BR:
ppic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP14_03326 (dnaQ)
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PhaeoP14_03326 (dnaQ)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PhaeoP14_03326 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ATG41363
LinkDB
All DBs
Position
3474618..3475355
Genome browser
AA seq
245 aa
AA seq
DB search
MREIVLDTETTGFDPFSGDRIVEIGAVELFNHMPTGETFHVYINPKRSMPQDAFKVHGIG
PDLLEPPQQPGPGAVTLRDKPVFAKVGQKFLDFVRDSKMVIHNAAFDMKFLNAELDWMGL
PKLPMEQAVDTLAIARKRFPGSPATLDALCRRFNIDNSNRTLHGALLDSEILADVYLELI
GGRQPDFGLSTSNDKASSGATVTDDWRPTARPSPLPSRLTEKEQEAHAKFVAKMGDDALW
NGAGS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgttcttgatacggaaaccaccggctttgatccgttttctggtgaccgg
attgtcgaaatcggtgcggttgaactgttcaatcacatgccgacgggtgagacatttcac
gtctatatcaaccctaaacgctccatgccgcaggacgcgtttaaggtgcacggcatcggg
ccggatcttctggagccgccacagcaacccggtccaggcgctgtaacactgcgcgacaag
cccgtgttcgcgaaagtgggccagaaatttctggatttcgtccgggattccaaaatggtg
atccataacgcggccttcgatatgaagttcctcaatgcggagctggattggatggggcta
ccaaagctgccgatggaacaggcggttgatacgctggcgattgcccgcaaacgctttcct
ggctcgccggcgacgctggatgcgctctgccgccgcttcaatatcgacaacagcaatcga
acattgcacggcgcgttgctcgattccgaaatcctggccgatgtctatctggaactgatc
ggggggcggcagcctgattttggcctttcaacctccaatgacaaggccagcagcggggcg
acggtgacagatgactggcgcccgaccgcccggccctccccgctgccgtcgcggttgaca
gagaaggaacaggaggcacatgccaagtttgttgcaaaaatgggggatgacgccctttgg
aacggcgccggtagctga
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integrated database retrieval system
