Phaeobacter piscinae: PhaeoP14_03340
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Entry
PhaeoP14_03340 CDS
T05105
Symbol
addA
Name
(GenBank) double strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_03340 (addA)
Enzymes [BR:
ppic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PhaeoP14_03340 (addA)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PhaeoP14_03340 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATG41377
LinkDB
All DBs
Position
complement(3484946..3488314)
Genome browser
AA seq
1122 aa
AA seq
DB search
MTARDAASEAQFRAARPDASTWLAANAGSGKTKVLTDRVARLLLRGVQPQHILCLTYTKA
AASEMQNRLFKRLGEWAMLGDDALTSALTDLGAHDVISAEGMAQARTLFARAIETPGGLK
IQTIHSFCASLLRRFPLEAGVSPQFSEMDDRAAVLLRGEVVEAIANSENPEEAGLIARLA
RQVTDSDFETLTAAICQRRSDFEVPLDRAGLRALFDLPTDFDAKMLEQSVYLGGEGDLLA
RTCTMLEQGGSTDAKAAAKLHKITEPTLADLPVLESVFLTGASAKAPFTAKINAFPTKKL
RESNVALMDQLEPLMRRVEAARAQRLALAAVEKSLILHDFAAAFLPEYDRRKQLRGWLDF
DDLILKARQLLNDPAVAAWVLYRLDGGIDHILVDEAQDTSPVQWDVVEKLAQEFTAGEGA
RSEVERTIFVVGDKKQSIYSFQGADPDAFDRMQAEFADRLAETGSALQNAALEFSFRSSA
AILGLVDLVFKDSPGAGFHRDALHRAFKSELPGRVDLWPVVDKVDTEEERDWTDPVDRPG
ARHHTVILADRIATTIKEMIDSKVTLPEDGPERGSFRRRPVRAGDFLILVQRRSELFSEI
IRACKAARLPIAGADRLKIGAELAVKDLAALLSFLATPEDSLSLAAALKSPLFGWDEQTL
FDLAHRREGGSYLWTALRDRAAEYPDTMAIIDDLRSQTDFLRPYDLIERILTRHGGRQRL
LGRLGPEAEDGINALLSQALAYERTDIPSLTGFLVWMQADDLEIKRQMGAAGNMIRVMSV
HGSKGLEAPIVILPDTAKRKPPRDDEIMRAEAGPMWKLPSAQMPDVMQAARETAQEKARN
ERLRLLYVALTRAEKWLIVAAAGELSKDGDSWYQMVERALQEAGANPYDTGNGEGLRLQH
GDWDGLPFHADPPVVTSTPQLPEVFKQLPPPYQPPTSTLSPSELGGAKALPGDLGQDEDI
AKARGSRLHSLLEHLPSADQDSWPQLADALLAGHEDTADLLAEATRVLTNPDLGAIFAPD
TLAEVAITADLDGRRIHGVIDRLIVTPDRVQAVDFKSNATVPTSVEACPEGLLRQMGAYA
HALAALYPDRRIDTALLWTRTATLMDLPHDIVSSALKRRQIP
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgcgacgccgcctcagaggcgcagtttcgcgccgcgcgccccgatgcctca
acctggctggccgcaaatgccggctctggcaagaccaaggtgctgacagatcgcgtggcc
cgtctgttgctgcgtggggtccagccgcagcatatcctgtgcctgacctacaccaaggcc
gctgccagcgagatgcagaaccgcctgttcaaacggctcggcgaatgggccatgctgggc
gacgatgcgctcacttctgcactgacagatctgggcgcccatgatgtcatctcggccgag
ggtatggcgcaagcccgcaccctgtttgcgcgtgcgattgagacgcccggtggcttgaaa
atccagaccatccattccttttgcgcctcgctgctgcgccggttcccgctagaggccggc
gtcagcccgcagttctccgagatggatgaccgcgccgcggtattgctgcggggcgaggtg
gttgaagccatcgcaaacagcgaaaacccggaggaggccggtctgatcgcgagactggcc
cggcaggtgaccgatagcgattttgagacgctgaccgccgcaatctgtcagcgccgctcc
gatttcgaggtgccactggatcgcgccggattgcgtgcgctgttcgatcttccgacggac
tttgacgccaaaatgttggagcaaagcgtctatctggggggtgagggggacctgctggcg
cgcacctgtaccatgttggaacagggtggcagcaccgatgccaaggccgctgcgaagctg
cataaaatcaccgagccgacgcttgcagatttacccgttcttgaatcggtgtttctgacc
ggggcctccgccaaggcgccctttaccgccaaaatcaacgcctttcccaccaagaaactg
cgggaaagcaatgtcgcgctgatggatcagctggaaccactgatgcgtcgggttgaggcg
gcccgcgcccagcgcctcgccttggccgcagttgagaaatcgctgattctgcatgacttc
gccgccgcattcctgccggaatatgatcgccgcaaacagctgcgcggctggctcgacttt
gacgatttgatccttaaggcacgccagctgctgaatgatccggccgtggctgcctgggtt
ctctaccggctggacggcggcattgatcacatactggtggatgaggcgcaggataccagc
ccggtgcaatgggatgtggttgagaagctggcgcaggagtttaccgcaggggagggcgcg
cgatccgaggtcgagcgtacgatttttgtcgtcggcgacaagaaacagtcgatctattcc
tttcagggggcagatccggacgcctttgacaggatgcaggccgaattcgccgaccggctc
gcggaaaccggcagtgcgctgcaaaacgcggcgctggaattctcgttccggtcctccgcg
gcgatccttgggctggttgatctggtgttcaaggatagccccggcgccgggtttcaccgc
gatgccctgcaccgcgcctttaaatcggaattgccgggtcgcgtcgatctttggccagtc
gtggacaaagttgacaccgaagaagagcgtgactggaccgacccagtcgatcgccccggc
gcgcgccatcacactgtcattctggcggaccggatcgcgaccacgatcaaggagatgatc
gacagcaaggttaccctgccggaggatgggcccgagcgtggcagtttccgccgtcgcccg
gtacgggccggtgattttctgatcctcgtgcagcgccggtccgagctgttctcagaaatc
atccgcgcctgcaaggctgcaagactgcccatcgccggcgcggaccggttgaagatcggc
gcagaactggcggtgaaggatctggcggcgctgctgtcctttctcgctacgcctgaggat
tccctgtcgctggctgcagcgctgaaatcgccgctgtttggctgggacgaacagaccctg
tttgatctggcccaccggcgcgagggcggcagttatctctggaccgcgctgcgggatcgc
gcagcggaataccctgacacgatggccatcatagatgatctgcgcagtcagaccgatttc
ctgcgtccctatgacctgattgagcggatcctgacacgtcacggcggacgtcagcgcctg
cttggccgattgggacctgaggcggaggatggcattaacgctttgctcagccaggcactg
gcctatgagcgcacggatattcccagcctgaccggatttcttgtctggatgcaggccgac
gatctggaaatcaaacgccagatgggcgcggcgggcaatatgatccgggtgatgtcggtg
catggatcaaaaggcctcgaagcaccgattgtgatcctgcccgacaccgcaaaacgcaaa
cctccacgcgatgatgaaatcatgcgcgctgaggctgggccgatgtggaaactacccagc
gcccagatgcccgatgtgatgcaagccgcccgcgagaccgcgcaggagaaggcccggaat
gaacgactgcggctgctctacgtggcgctgacacgcgcagaaaaatggctgattgttgcc
gctgcgggtgagctgtccaaggatggggacagttggtaccagatggttgagcgcgcgctg
caagaggccggtgccaacccctatgataccggcaatggcgagggactgcggctgcagcat
ggggattgggacgggttaccgttccacgcagatcccccggtggtcacgtccacgccgcaa
ttgccggaggtattcaaacagttgccaccgccttatcagccaccaacctcaacactcagc
ccgtcggaattgggcggggccaaggccttaccgggggatctgggacaggacgaagatatc
gccaaggcacgcggcagccggctgcacagcttactggaacatctacccagcgcagatcag
gatagctggccccaactggcggatgctttgctcgcggggcatgaagacaccgcagatctt
ctggctgaggcaacacgtgttctgaccaatccggacctgggtgcgatcttcgctcctgac
actttggcggaggttgcgataaccgcagatctggatggccgtcgcattcatggcgtgatt
gaccggctgatcgtgacgccggaccgggttcaggcggttgatttcaaatcgaacgccacc
gttcccaccagcgtggaggcctgtccggaggggctgttgcggcagatgggggcttatgcc
catgcgctggcagccctctacccagatcggcggattgacacggcgttgctctggacccgt
accgcgacgctgatggacctgccacacgatattgtgtcatccgctcttaagcgccgccag
ataccttga
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