Pseudomonas piscis: QL104_01495
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Entry
QL104_01495 CDS
T09652
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QL104_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppii03019
]
QL104_01495
03400 DNA repair and recombination proteins [BR:
ppii03400
]
QL104_01495
Enzymes [BR:
ppii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QL104_01495
Messenger RNA biogenesis [BR:
ppii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QL104_01495
DNA repair and recombination proteins [BR:
ppii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QL104_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
MarR_2
Cys_Met_Meta_PP
SNF2-rel_dom
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
WMN18104
UniProt:
A0ABY9NI31
LinkDB
All DBs
Position
333237..335171
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AA seq
644 aa
AA seq
DB search
MYSTLEQVFGYPGFRPGQEATISAVLAGRSAAAIFPTGSGKSLCYQLPALLLPHLTLVVS
PLLALMQDQLAFLQRHGIAAASIDSAQGRDEANQVMARARTGELKILMISVERLKNERFR
NFLQQVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQALLLTATATPQVIADM
QARFAIAATDVVTTGFYRSNLNLLVEPVAGIDKRRRLVQWLGERNGQPSIVYVTLQKTAE
QVAEYLGQQGIAAQAYHAGLPHEQREAIQRRFMQGHSQCIVATIAFGMGIDKSDIRNVVH
FDLPKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFVYGDTPELSGIRCVLDELL
AAAPTGQWELLLGPLADQSNIRQLPLKTLLVQLELRGLIAPRYAYFAEYRFKLLLEPADL
LGRFEGERRDFVEAILHTSSRARTWATVDFDALYDHCQAPRQRVVKALDYFQEKGWVELE
SKQMTEVYSLLQGDFDAPALSAELHAYFTRHEAGEIARIHAMLDLFASEQCLGHRLAEYF
GDRQAPRQCGHCSVCRGQVARLPEPPALPALVDKNFAGLCGDFIHRHQQHTGVLPGAERL
TRFLCGISVPLFTRLKVRGIPGFAALEDYPYAEVRQWCESHVPA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcaccctcgaacaggtctttggttatccaggctttcgcccgggccaggaggcc
accatcagcgcggtgctggccgggcgctcggcggcggcgatctttcccactggttccggc
aagtccctgtgctaccagctgccggccctgctgctgccgcacctgaccctggtggtgtcg
ccgctgctggccttgatgcaggaccagctggcctttctccagcgccatggcatcgccgcg
gcgagcatcgattcggcccagggtcgcgatgaggccaaccaggtgatggcccgcgcccgc
accggggaactgaagatcctgatgatctcggtggaacgcctgaagaacgaacgctttcgc
aacttcctgcagcaggtgcccatctccttgctggtggtggacgaggcccactgcatttcc
gagtgggggcacaacttccggcccgactacctgaagctgccggactaccagcgccagttc
aatatcccccaggccctgctgttgaccgccacggccaccccccaggtgatcgccgacatg
caggcgcgcttcgccatcgccgccaccgatgtggtgaccaccggtttctatcgatccaac
ctcaacctgctggtggagccggtcgccgggatcgacaagcgccggcgcctggtgcagtgg
ctgggcgagcgcaatgggcagccgagcatcgtctacgtgaccttgcagaagaccgccgag
caggtcgccgagtacctgggccagcagggcattgccgcccaggcctaccacgccggtttg
ccccatgagcagcgtgaggcgatccagcgccgcttcatgcagggacacagccagtgcatc
gtcgccaccatcgccttcggcatgggcatcgacaagagcgatattcgcaacgtcgtgcat
ttcgacctgcccaagtccatcgagaactacagccaggaaatcggccgcgccgggcgcgat
gggcaaccctcggactgcctggtgctggccaaccgcgacagtctaaacgtgctggagaac
ttcgtttatggcgataccccggagctgagcgggatccgttgcgttctcgatgagttgctg
gccgcagcgcccaccgggcagtgggagctgttgctgggccccttggcggaccagagcaac
attcgccagttgccgctcaagaccctgctggtgcaactggaactgcgcggcctgatcgct
ccgcgctatgcctatttcgccgaataccgcttcaagttgctgctggagccggctgatcta
ctggggcgtttcgaaggtgaacggcgggacttcgtcgaggccatcctgcacacctccagc
cgcgcccggacctgggccacggtggatttcgacgcgctctacgaccactgccaggcaccg
cgccaacgggtggtcaaggccctggactacttccaggaaaaaggctgggtggagttggaa
agcaagcagatgaccgaggtctacagcctgctgcagggcgacttcgatgcgccggcgcta
agtgccgagctgcacgcctacttcacccgccatgaggctggcgagatcgcgcggatccac
gccatgctcgacctgttcgccagcgagcagtgcctggggcatcggttggcggagtatttc
ggtgaccggcaggcacctcggcagtgtgggcattgttcggtgtgccggggccaggtggcg
cgcttgcccgagccacccgcgctgcctgcgcttgtggataagaacttcgccggcttgtgt
ggcgactttatccacaggcaccagcagcacaccggggttcttcccggggccgagcgcctg
acgcgttttctctgtggcatcagcgtgccgttgttcaccaggctcaaggtccgtggtatc
ccggggttcgccgcgctggaggactacccctacgccgaggtacggcaatggtgcgagagc
catgtgccggcctga
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