KEGG   Pseudomonas piscis: QL104_01550
Entry
QL104_01550       CDS       T09652                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
ppii  Pseudomonas piscis
Pathway
ppii02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppii00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    QL104_01550
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ppii02022]
    QL104_01550
Two-component system [BR:ppii02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   QL104_01550
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_2 HTH_50 FleQ HTH_8 AAA AAA_16 DUF6716 HTH_10
Other DBs
NCBI-ProteinID: WMN18115
LinkDB
Position
complement(344801..346207)
AA seq 468 aa
MTRPDSLDPQLQVVLIDDDPHLRQALSQTLDLAGLKVLSLGEAQGLAERLERDWPGVVVS
DIRMPGIDGMELLSQLHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLD
SVRRALAWRRLVLDNRSLRLALSDRQELSARLVGQSASILRLRQQIGALAATRADVLILG
ETGAGKEVVARALHDLSGRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQAA
DQGRFRADLYYRLNVAPLRIPPLRERGEDVLMLFQHFADEASSRHGLPVQELQPGHRALL
LRHTWPGNVRELQNVAERFALGLELALDNGDPGQAPAATAPLISGGLSEQVEHFEKSLIA
AEMAQPHSSLRSLAEALGIPRKTLHDKLRKHGLNFADSGAGQPGDESE
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgacccgtcccgacagcctcgacccccagttgcaagtggtgttgatcgacgacgacccg
cacctgcgccaggccttgagccagaccctggacctggccgggctcaaggtcttgtccctg
ggcgaggcccagggcctggccgagcgcctggagcgggattggccgggggtggtggtcagt
gacatccgcatgcccggcatcgacggcatggaactgctgagccagttgcatgcccaggac
ccggaactgccagtgctgctgatcaccgggcatggcgacgtgcccctggcggtacaggcg
atgcgcgccggggcctacgacttcctggaaaaacccttcgccagcgatgccctactggac
agcgtgcgccgcgccctggcctggcgccgcctggtgctggacaaccgcagcctgcgcctg
gccctgagcgatcgccaggaactgagcgccaggctggtgggacagtcggcttccatcctg
cgcctgcgccagcagatcggcgccctggcggcgacccgcgccgatgtgctgatcctcggc
gaaaccggggccggcaaggaggtggtggcccgggccctgcacgatctgtcaggaagacgt
aacggaccgttcgtcgcgatcaacgccggggccctggcggagtcggtggtggagagcgag
ctgttcggccacgaacctggagccttcaccggcgcgcagaagcggcgcatcggcaagttc
gagttcgccaatggcggcacgctgttcctcgatgaaatcgaaagcatgagcctggatgtc
caggtcaagctgctgcgcctgctccaggagcgagtggtggagcgcctgggcggcaaccaa
ctgatcccgctggatatccgcatcatcgccgcgaccaaggaagacctgcgccaggcggcg
gaccaggggcgtttccgggccgacctctactaccgcctgaacgtggcgccactgcggatt
ccgccactgcgcgagcgcggcgaggatgtgctgatgctgttccagcactttgccgatgaa
gccagcagccgccacggcctgccggtccaggagctgcaaccggggcaccgtgccctgctg
ctgcgccacacctggccgggcaacgtgcgcgagttgcagaacgtcgccgagcgcttcgcc
ctgggcctggagttggccctggacaacggcgatccgggacaggccccagccgcgaccgca
ccgctgatcagcggcggcctgagtgaacaggtcgagcatttcgagaaatcgctgatcgcc
gccgaaatggcccagccccacagctcgctgcgcagtctcgccgaggccttgggcatcccg
cgcaagaccctgcacgacaagctgcgcaagcatggcctgaacttcgcagacagcggcgcc
ggacaacccggcgacgaatcggaatga

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