Pseudomonas piscis: QL104_01565
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Entry
QL104_01565 CDS
T09652
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii00521
Streptomycin biosynthesis
ppii00523
Polyketide sugar unit biosynthesis
ppii00541
Biosynthesis of various nucleotide sugars
ppii01100
Metabolic pathways
ppii01110
Biosynthesis of secondary metabolites
ppii01250
Biosynthesis of nucleotide sugars
Module
ppii_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QL104_01565 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QL104_01565 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QL104_01565 (rfbC)
Enzymes [BR:
ppii01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QL104_01565 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WMN18118
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All DBs
Position
complement(349008..349553)
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AA seq
181 aa
AA seq
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MKVIATELPGVLIIEPKVFGDERGFFYESFNAKVFAEATGVDVQFVQDNHSRSQKGVLRG
LHYQLQNTQGKLVRVTQGEVLDVAVDIRRSSPHFGQWVAVRLSATNHRQMWVPEGFAHGF
VVLSDCAEFLYKTTDYYTPSAERSIRWDDPTLAIDWELSEPPQLSAKDQAGSLLTEADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcattgccaccgaactgcccggcgtgctgatcatcgagcccaaggtgttcggc
gacgaacgtggtttcttctacgaaagcttcaatgccaaggtcttcgccgaagcgaccggg
gtcgacgtgcagttcgtccaggacaaccactcgcgctcgcagaagggcgtgctgcgcggc
ctgcattaccagttgcagaacacccagggcaagctggtgcgcgtgacccagggcgaagtg
ctcgacgtcgccgtcgatatccgtcgcagctcaccgcacttcggccagtgggtggcggta
cgcctgtcggcgaccaatcatcggcagatgtgggtgcccgagggattcgcccatggtttt
gtggtgctaagcgattgcgccgagttcctctacaagaccaccgactactacacgccatcg
gcagagcgcagtatccgctgggacgatccgacgctggccatcgactgggagctcagcgag
cccccgcaactctccgccaaggaccaggcaggaagcctgttgactgaggccgacctgttc
ccatga
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