Pseudomonas piscis: QL104_01575
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Entry
QL104_01575 CDS
T09652
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii00521
Streptomycin biosynthesis
ppii00523
Polyketide sugar unit biosynthesis
ppii00525
Acarbose and validamycin biosynthesis
ppii00541
Biosynthesis of various nucleotide sugars
ppii01055
Biosynthesis of vancomycin group antibiotics
ppii01100
Metabolic pathways
ppii01110
Biosynthesis of secondary metabolites
ppii01250
Biosynthesis of nucleotide sugars
Module
ppii_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QL104_01575 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QL104_01575 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QL104_01575 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QL104_01575 (rfbB)
00525 Acarbose and validamycin biosynthesis
QL104_01575 (rfbB)
Enzymes [BR:
ppii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QL104_01575 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WMN18120
UniProt:
A0ABY9NID6
LinkDB
All DBs
Position
complement(350422..351504)
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AA seq
360 aa
AA seq
DB search
MRILVTGGAGFIGSALVRHLIQHTEHEVLNLDKLTYAGNLESLHSIASNSRYEFVKADIV
DQATVSAILARFQPHAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEATRAYWHRLPE
AEKAAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLITNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALFKVVT
EGVVGETYNIGGHNEQKNIDVVRGICSLLEELAPHKPEGVGHYADLITFVQDRPGHDLRY
AIDAGKIERELGWVPQETFTSGLRKTVQWYLENLEWCRRVQDGSYQGERLGSTDIKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcttgtcaccggcggagccggctttatcggctcggccctggtccgccacctg
atccagcacacggaacatgaagtcctgaacctggacaagctgacctatgcgggcaacctg
gaatcgctgcatagcatcgccagcaacagccgctatgaattcgtcaaggccgacatcgtc
gaccaggccaccgtcagtgccatactggcccgcttccagccccacgccatcatgcacctg
gcagccgaatcccatgtggaccgctccatcgacggaccgtcggacttcatccagaccaac
atcgtcggtacctacagcctgctggaagcgacccgcgcttactggcaccggttgcccgag
gcggaaaaagccgccttccgtttccaccatatttccaccgacgaggtctacggcgacctg
catggcgtcgacgacctgttcaccgaaaccacgccctatgcccccagttcgccctattcc
gcgagcaaggccgcgtccgatcacctggtccgcgcctggcagcgcacctacggcctgccg
gtcctgatcaccaactgctccaacaactatggcccgttccacttccccgagaagctgatc
ccgttggtgatcctcaatgcactggcgggcaagccactaccggtctatggcaatggcctg
caagtacgggactggctgtacgtcgaggatcatgcccgggccctgttcaaggtggttacc
gagggcgtggtgggcgagacctacaacatcggcggccataacgaacagaagaacatcgac
gtggtgcgcggcatctgcagcctgctggaagaactggccccacacaaacccgagggcgtg
ggccactacgccgacctgatcaccttcgtccaggaccgtcccggccacgatctgcgctat
gccatcgacgccggcaagatcgaacgcgaactgggctgggtaccccaggagacctttacc
agcgggctgcgcaagaccgtgcagtggtatctggaaaacctcgaatggtgccgtcgggta
caagacggcagctaccagggcgaacgcctgggctccaccgacatcaaggatctgattgca
tga
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