KEGG   Pseudomonas piscis: QL104_02720
Entry
QL104_02720       CDS       T09652                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ppii  Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:ppii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppii03032]
    QL104_02720 (parE)
   03036 Chromosome and associated proteins [BR:ppii03036]
    QL104_02720 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppii02048]
    QL104_02720 (parE)
Enzymes [BR:ppii01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     QL104_02720 (parE)
DNA replication proteins [BR:ppii03032]
 Prokaryotic type
  DNA Topoisomerases
   QL104_02720 (parE)
Chromosome and associated proteins [BR:ppii03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    QL104_02720 (parE)
Prokaryotic defense system [BR:ppii02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    QL104_02720 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 TOPRIM_C HATPase_c_2
Other DBs
NCBI-ProteinID: WMN18342
LinkDB
Position
612452..614356
AA seq 634 aa
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTTRPNHLAQEVIDNSVDEALAGHAKSIQ
VILHADHSLEVSDDGRGMPVDIHPEEGVSGIELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSSQVRVRVKRDGSEYQMTFADGYKASELEVVGSVGKRNTGTSVFFAPDPKYFDS
PKFSVSRLKHVLKAKAVLCPGLLVSFEDKGTGEKVEWHYEDGLRSYLVDAVSEFERLPAE
PFCGSLAGNKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRNLLPRGLKLAPEDVWERIAFVLSMKMQDAQFSGQTKERLSSREAAAFVSGVVKDAFSL
WLNANPELGMQLAELAISNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAED
MSQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIF
YALDDAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDV
EATAEIMDMLLAKKRAGDRKSWLESKGNLAEVLA
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccactcccagcgctagctcctataacgcagacgccatcgaagtcctctcgggactc
gacccggtgcgcaaacgcccgggcatgtacaccgacaccacgcggcccaaccacctggcc
caggaagtcatcgacaacagtgtcgacgaagccctggccggccatgcgaagtcgatacag
gtcatcctgcacgccgatcattccctggaagtgtccgacgacggtcgtggcatgccggtg
gacatccacccggaagagggcgtatccggcatcgagctgatcctcaccaagctccacgcc
ggcggcaagttctccaacaagaactaccagttctccggcggcttgcacggggtgggcatt
tccgtggtcaacgccctgtccagccaggtacgggtgcgggtcaagcgcgatggcagcgag
taccagatgaccttcgccgacggctacaaggcttccgagctggaagtggtcggcagcgtt
ggcaagcgcaataccggtacctccgtattcttcgccccggacccgaaatacttcgattcg
ccgaaattctccgtcagccgcctcaagcacgtgctcaaggccaaggccgtgctgtgcccg
gggctgctggtcagcttcgaggacaagggcaccggcgagaaggtcgagtggcattacgaa
gatggcctgcgttcctacctggtggatgctgtcagcgagttcgagcgcctgccggccgag
ccgttctgcggcagcctggcgggtaacaaggaggcggtggactgggccctgctgtggctg
cccgagggcggcgacagtgtccaggaaagctacgtcaacctgattcctaccgcccagggc
ggtacccacgtcaacggcttgcgccagggcctgctggacgccatgcgcgagttctgcgag
ttccgcaacctgttgccgcgcggcctcaagctggcaccggaggacgtctgggagcggatc
gccttcgtcctgtcgatgaaaatgcaggacgcgcagttctccggccagaccaaggagcgc
ctgtcgtcccgcgaggctgcggcgttcgtttccggggtggtcaaggatgccttcagcctg
tggctcaacgccaaccccgaactggggatgcaactggcggagctggccatcagcaacgcc
ggccgacgcctcaaggccagcaagaaggtcgagcgcaagcgcatcacccagggcccggca
ttgccgggcaagctggccgattgtgccggccaggacccgatgcgttccgagctgttcctg
gtggaaggtgattccgccggtggttcggccaagcaggcgcgggacaaggagttccaggcg
atcctgccgctgcgcgggaagatcctcaacacctgggaagtggacggcagcgaggtcctg
gccagccaggaagtgcataacatcgccgtggccatcggtgtcgacccaggcgccgaggac
atgagccagctgcgctacggcaagatctgcatcctcgccgacgccgactccgacggcctg
cacatcgccaccttgctctgcgccctgttcgtgcagcatttccgcccgttggtggatgcc
ggccacgtctacgtagccatgccaccgctgtaccggatcgacctgggcaaggagatcttc
tacgccctggacgacgccgagcgtgacggcatcctcgatcgcctggtggccgagaagaaa
cgcggcaagccgcaagtcacccgattcaagggcctgggtgaaatgaacccgccgcaactg
cgcgagaccaccatggaccccaatacccggcgcctggtgcagttgaccctggacgacgtc
gaggccaccgcggaaatcatggacatgctgctggccaagaaacgcgccggcgaccgcaag
tcctggctggagtccaagggcaacctggccgaggtgctggcctga

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