Pseudomonas piscis: QL104_04220
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Entry
QL104_04220 CDS
T09652
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppii03021
]
QL104_04220 (nusA)
03009 Ribosome biogenesis [BR:
ppii03009
]
QL104_04220 (nusA)
Transcription machinery [BR:
ppii03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
QL104_04220 (nusA)
Ribosome biogenesis [BR:
ppii03009
]
Prokaryotic type
rRNA transcription factors
QL104_04220 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF507
KH_NusA_C
KH_2
DUF2187
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
WMN18618
LinkDB
All DBs
Position
926576..928057
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPASVIFEALELALATATKKRFEDEVDLRVDINRHTGSYETFR
RWIVVEEADLDDPAVEIWPSKAHETHPDAKVGDVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDENPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIDELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVVTREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggtgtaccggca
agcgtgatttttgaagcgctggagctggccctggccactgctaccaagaagcgttttgaa
gacgaagtggacctgcgtgtggatatcaaccgccacaccggttcctatgaaactttccgt
cgctggattgtggtcgaagaagccgacctggatgatccggcggtggagatctggccgagc
aaggcccacgagactcatcccgatgccaaggtcggtgatgtgatcgaggaaaagatcgaa
tccatcgagttcggccgcatcgctgcccagaccgccaagcaggtcatcgtgcagaaggtt
cgcgaagccgagcgcgcacaggtggtggatgcctaccgcgagcgtctgggcgagatcatc
tccggcaccgtcaagaaggtgacccgagacaacgtgatcgtcgacctgggcaacaacgcc
gaggcgttgctggctcgtgaagacatcatctcccgtgagactttccgagttggcgtgcgc
ctgcgcgcgctgctcaaggaaatccgcaccgagaaccgcggcccgcagctgatcctgtcg
cgtaccgctccggaaatgctgatcgagctgttccgtatcgaagtgccggaaatcgccgag
ggcctgatcgaagtcatggccgcttcccgtgatccgggttcgcgggccaagatcgccgtt
cgctccaaggacaagcgcatcgacccgcagggcgcgtgcatcggtatgcgcggttcgcgc
gtccaggccgtttccggcgaattgggcggtgagcgcgtagacatcgtactgtgggacgag
aacccggcgcagttcgtgatcaacgccatgtcgccggccgaagtagcggccatcatcgtc
gacgaagatgcccacgccatggacatcgccgttggcgctgacaacttggcccaagccatt
ggccgcggcggtcagaacgtgcgcctggctagccagttgactggctggaccctgaatgtg
atgaccgaatcggacatccaggccaagcagcaagcagaaaccggcgacatcctgcgcaat
ttcatcgacgagctggaagtcgatgaagagctggcgcaggttctggttgatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacatcgtcaacgagcttcgcgctcgcgccaaggaccgtttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtagttacccgcgaagac
ctggccgagcagtctattgacgacctgctcgacatcgacggcatcgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccattggttcgagtaa
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