Pseudomonas piscis: QL104_04235
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Entry
QL104_04235 CDS
T09652
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppii03016
]
QL104_04235 (truB)
Enzymes [BR:
ppii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QL104_04235 (truB)
Transfer RNA biogenesis [BR:
ppii03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QL104_04235 (truB)
Prokaryotic type
QL104_04235 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WMN18621
LinkDB
All DBs
Position
931162..932079
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQMGKTTSTADAEGEVLRTREVTVGRADIEAVLPEFRGEIK
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI
RTLVEDIGERLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaagcgtatccgccgtaacgtcagcggcatcattctgttggacaagccc
ctgggcttcacctccaacgcggcattgcagaaggtccgctggctgctcaatgccgagaag
gccggccataccggcagcctcgaccccctggccaccggcgtgctgccgctgtgcttcggc
gaggccaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctgatg
caaatgggcaagaccaccagcaccgcggatgccgaaggcgaagtgctgcgtacccgcgaa
gtgaccgttggtcgtgccgatatcgaagcggtattgccggaatttcgtggtgaaatcaag
cagataccacccatgtactccgccctcaagcgtgacggccagcctctctacaagctggct
cgtgcaggggaagtggtggagcgcgaaccgcgttctgttactattgcgcgcctggaattg
ctcgcctgcgaaggtgacaccgctcgcctggcggtggattgcagcaaaggcacctatatc
cgcaccctggtggaggatattggtgagaggctcggttgtggtgcgtacgtcgcggaactg
cggcggacccaggccggccctttcagcctggcccagacggtcaccctggaagagctcgag
gcagtgcatgccgaaggtggcaacgaggcggttgatcgtttcctgatgccatcggatagc
ggcctgcaggattggcccttgctgcacttctcggaacacagtgcgttctactggctcaat
ggccaaccggtacgcgctcccgatgcaccgaagttcggcatggtgcgggtacaagatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagagtga
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