Pseudomonas piscis: QL104_05980
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Entry
QL104_05980 CDS
T09652
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppii03016
]
QL104_05980 (truD)
Enzymes [BR:
ppii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
QL104_05980 (truD)
Transfer RNA biogenesis [BR:
ppii03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QL104_05980 (truD)
Prokaryotic type
QL104_05980 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WMN18955
LinkDB
All DBs
Position
1322083..1323141
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AA seq
352 aa
AA seq
DB search
MNELQLLGPRAYGDALGSAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLAAAENHTLKILKASRHRR
KLQRGAHAANGFTLRLTELRADHAAIDARLQLIARQGIPNYFGAQRFGHDGGNLVDARDW
AARQALPEQRNVRSRLLSAARSYLFNQVLGARVADGSWQQAQVGDLLAFTDSRSFFMAGA
EECHDPRLAILDLHPTGPLWGKGDSPAAGATQILEQGVATREPALCDWLVKAGMEHERRI
LRLPIGGLTWHYPVPDILQLEFVLPAGCFATALVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactgttgggcccgcgggcctatggcgatgccttgggcagcgcggtg
ctcaaggccacggccgaggatttccaggtcgatgaggtcctggacattcctctgagcggc
gatggcgagcatttatggctgtgggtggaaaagcgcggcctgaataccgaggaagctgcc
cggcggatcgccaaggccgccggggtcccgctgcgtacggtgagctatgccggactcaag
gaccgccaggccctgactcgccaatggttcagcgtgcaactgccgggcaaggccgatcca
gacctggcggcagccgaaaaccacaccctgaagatcctcaaggccagtcgccacaggcgc
aagctgcaacgcggcgcccatgcagccaatggcttcaccttgcgcttgaccgagctgcgg
gcggatcacgcggcgatcgatgcccgcctgcaattgatcgcccggcaaggcattcccaat
tacttcggtgcccagcgttttggccatgacggcggcaacctggtggatgcccgggactgg
gcggcacgccaggcgttgccggaacagcgcaacgtgcgttcgcgcttgctgtccgccgcc
cgtagctacttgttcaaccaggtcctgggcgcacgggtggccgacggcagttggcagcag
gcccaggtgggcgatctgctggccttcaccgacagccgcagttttttcatggctggagct
gaggagtgccacgatccgcgcctggccattctcgacctgcatcccaccgggcccttgtgg
ggcaaaggcgactcgcctgccgccggtgctacccagatcctggagcagggcgtcgctacc
cgtgaaccggcgctgtgcgattggttggtaaaagccggcatggagcacgaacgacgcatc
ctgcggctgcccattggcggtttgacgtggcattatcccgtgcctgacattctgcaattg
gaattcgtcctgccggccggatgtttcgccaccgcattggtgcgcgaactcgtcgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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