Pseudomonas piscis: QL104_06760
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Entry
QL104_06760 CDS
T09652
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppii03021
]
QL104_06760 (rapA)
Transcription machinery [BR:
ppii03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
QL104_06760 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
DUF4164
Motif
Other DBs
NCBI-ProteinID:
WMN19105
LinkDB
All DBs
Position
complement(1462880..1465729)
Genome browser
AA seq
949 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQEVEDVDGLLVYHGLDAQNQPVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSPLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
SNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEEQASPEYTLVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAEAVQELLDQ
GRLSPEAHKTIQGFLGNEGEALLAAVNDGDSEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPCPDQYLELPLGEHAELYPEVSFQAQPEASDDDQRWWKFDPRVEWLID
QLKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHVIELHVPYLETS
PQERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDGQWQALIDEARGERERL
EAELHTGRDRLLELNSGGAGEGESLVEAILEQDDQFALPIYMETLFDAFGIDSEDHSDNA
LILKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFITWEHPMVQGGMDLVLSGSMG
NTAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSPRVA
FETLNDQLESVPKASANKFIQAQRDQLAPKINAGEAKIAPRHAERVAEAQRRLAADLDEE
LARLTALQAVNPTVRDSELVALRKQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagcggagctaggt
ctaggcaccgttctggcacaggacggccgcttgctgaccgtgctctacccggccactggc
gacactcgccagtatgcgctacggaatgcgcccctcacccgcgtgaggttttccccgggt
gacagcatcacccacttcgaaggctggaagatgaccgtgcaggaagtcgaggacgtcgac
ggcctgctggtctatcacggtctcgacgcacagaaccagcccgtcaccctgcctgagacc
cagctgtcgaacttcatccagttccgcctggccagtgaccgcctgttcgccgggcagatc
gacccgctggcctggttctcgctgcgctaccacaccctggaacacaccagccgccagctg
caatcgccactctggggcctgggcggcgtacgtgcccaacccatcgcccaccagctgcat
atcgctcgtgaagtcgccgaccgtatcgcgccacgggtactgctggcggacgaagtgggc
ctgggcaagaccatcgaggccggcctggtgatccatcgccaactgctgtcgggccgtgcc
agccgggtgctgatcctggttccggagaacctgcagcaccagtggctggtggaaatgcgc
cggcgcttcaacctgcaggtcgcactgttcgacgaagaacgcttcatcgaaagcgatgcc
agcaacccgttcgaagacacccagctggccctggtggccctggaatggctggtggacgac
gagaaggcccaggacgcgctgttcgccgccggctgggacctgatggtggtggacgaagcc
caccacctggtctggcacgaagaacaagccagcccggaatacaccctggtcgagcaactg
gccgagaccattcccggcgtcctgctgctgaccgccacccccgagcaactgggccaggac
agccacttcgcccgcctgcgcctgctggaccccaaccgcttccacgacctggcggccttc
cgcgccgagagcgagaactaccgtccggtggccgaagccgtgcaggaactgctggaccaa
ggccggctgtcccccgaagcgcacaagaccatccagggtttcctgggcaacgagggcgaa
gccctgctggccgccgtcaacgatggcgacagcgaagccagcgcacgcctggtgcgcgaa
ttgctggaccgccacggcaccggccgcgtgctgttccgtaacacccgcgccgcggtccag
ggcttcccggagcgcaagctgcacgcctatccgctgccgtgcccggaccaatacctggag
ctgcccctgggcgagcatgccgagctgtacccggaagtcagcttccaggcccagcccgag
gccagtgacgacgaccagcgctggtggaaattcgacccgcgggtcgagtggctgatcgac
cagttgaagatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgagaccgcc
atggacctggaagacgccctgcgcgtgcgctccggcatcccggccacggtcttccatgaa
ggcatgaacatcctcgagcgcgaccgcgccgccgcctacttcgccgacgaagagttcggt
gcccaggtgctgatctgctcggaaatcggcagtgaaggccgcaacttccagttcgcccat
cacctggtgatgttcgacctgcccgcgcacccggacctgctggaacagcggatcggccgc
ctggaccggatcggccagaagcacgtgatcgagctgcacgtaccctacctggagaccagc
ccgcaagagcgcctgttccagtggtaccacgaagcgctgaacgccttcctcaatacctgc
cctaccggcaacgccctgcagcaccagttcggcccgcgtttgctgccgctcctggaaaat
gccgacgacggccagtggcaggccctgatcgacgaggcccgcggtgaacgcgagcgcctg
gaagccgagctgcatactggccgcgaccgcctgctggaactgaactccggtggcgccggc
gaaggcgagtcgctggtggaggcgatcctcgagcaagacgaccagttcgccctgccgatc
tacatggagaccctgttcgacgccttcggcatcgatagcgaagaccattcggacaacgcc
ctgatcctcaagcccagcgagaagatgctcgacgccagcttccccctgggcgacgacgaa
ggcgtgaccatcacctacgaccgtggccaggccctgtcccgcgaggacatgcagttcatc
acctgggaacacccgatggtgcagggcggcatggacctggtgctgtccggttccatgggc
aacaccgccgtggcgctgatcaagaacaaggcgctcaagcccggcaccgtactgctggaa
ctgctctacgtcagcgaagtggtcgctccacgctcgctgcaactgggccgctacctgcca
ccggcggccctgcgctgcctgctggacgccaatggcaacgacctgtcgccacgggtggcc
ttcgagaccctcaacgaccagctggaaagcgtgcccaaggccagcgccaacaagttcatc
caggcccagcgcgaccagctggcaccgaagatcaacgccggcgaagccaagatcgcccca
cgtcacgccgagcgcgtggccgaggcccaacggcgcctggcggccgacctggacgaagag
ctggcgcgcctgaccgcgttgcaggcggtcaaccccaccgtccgcgacagcgagctggtg
gccctgcgcaagcaacgggagcaaggcctggccatgctcgaaaaagccgcgctgcgcctg
gaggcgatccgggtcctggtagcaggctga
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integrated database retrieval system
