Pseudomonas piscis: QL104_08235
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Entry
QL104_08235 CDS
T09652
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QL104_08235 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppii03019
]
QL104_08235 (recQ)
03400 DNA repair and recombination proteins [BR:
ppii03400
]
QL104_08235 (recQ)
Enzymes [BR:
ppii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QL104_08235 (recQ)
Messenger RNA biogenesis [BR:
ppii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QL104_08235 (recQ)
DNA repair and recombination proteins [BR:
ppii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QL104_08235 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HTH_23
Sigma70_r4_2
VBS
Motif
Other DBs
NCBI-ProteinID:
WMN19386
LinkDB
All DBs
Position
1738268..1740391
Genome browser
AA seq
707 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRPGLA
VVVSPLIALMEDQVATLEELGVAAAALNSTLSPEQQRDLAVRIRRGEVKMLYLAPERLVQ
PRMLAFLQSLDIALFAIDEAHCVSQWGHDFRPEYLQLGQLAEMFPEVPRIALTATADKRT
REEIVNRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLQAFLNERRSDAGIVYCLSRKK
VDEVAAFLCEQGFTALSYHAGLPAELRAYNQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLMLKQMLQNSEGDERHKRLEQHK
LDAMLALCEETRCRRQALLAYFDEDMPQPCGHCDNCVDGVQTWDATEPARQALSAIYRTG
QRYGVGHLVDVLLGKDTEKVRSFGHQHLSVFGVGKARSEGEWRSLFRQLVARGLADIDLE
GYGGLRLSDSCRPLLKGEVSLELRRDLKPQTAAKSTSQASQLVRGEEREQWEALRALRRK
LAEEHGVPPYVIFPDSTLLEMLRSQPGSMAEMARVSGVGARKLERYGAAFLEVLGGTAEA
PKVVADIRHELITLARAGMTPVQIAGQLQCTEKNVYTLLAEAIGKQQLSLEQALDLPEDL
LGEIQDAFLDGEGELPPVAEVIELFAGRVPEGVLYCVRAALQSEFEI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgtcctcaaggacatctttggctacgacagtttccgtggt
cgccagggggcgatcatcgagcgcgtggccagcggtggcgacgcgctggtgctgatgccc
accggtggcggcaagtccctgtgcttccaggttccggcattgctgcgccccggcctggcg
gtggtggtgtcgccattgatcgcgctgatggaggaccaggtcgccaccctggaggagctg
ggggtcgcagccgcggcgctgaactctaccctgagccccgagcagcagcgtgacctggcg
gtgcgtatccggcgtggcgaagtgaagatgctctacctcgctcccgagcggttggtccag
ccgcggatgctggcgttcttgcagagcctggatattgccctgttcgccatcgacgaagcc
cactgcgtatcccaatggggacatgacttccgtcccgagtacctgcaactggggcaactg
gcggaaatgttccccgaggtgccgcgaatcgccctgacggccaccgccgacaagcgaacc
cgcgaagagatcgtcaatcgcctgcacctggagaacgccgagcgcttcctgtccagtttc
gaccggccgaacatcttttatcggatcgtgcccaaggagcagccgcgcaagcagttgcag
gcgtttctcaacgagcggcgcagcgatgccgggatcgtctactgcctgtcgcgcaagaaa
gtcgacgaggtggcggcattcctctgcgagcagggcttcactgccttgtcctaccacgcg
gggttgccggccgagttgcgcgcctataaccagaagcgcttcctcaacgaggaagggctg
atcatggtggcgaccatcgccttcggcatgggtatcgacaaacccaacgtacgtttcgtc
gcccacctggacctgcccaagtccctggaggcctactaccaggaaaccgggcgcgccggc
cgtgacggcctgccggccgatgcctggatggcctatgggctgcaggacgtgctgatgctc
aagcagatgctgcagaactccgagggcgacgagcgccacaagcgcctcgagcagcacaag
ctcgacgcgatgctggcgctgtgcgaggaaacccgttgccggcgccaggcgctgctggcc
tatttcgatgaagacatgccgcagccctgcggtcattgcgacaactgtgtcgatggagtg
cagacttgggatgccaccgagccggcgcgccaggcgctgtcggcgatctaccgcaccggc
cagcgctatggcgtcgggcacctggtggacgtgctgttgggcaaggacacggaaaaggtc
cgcagcttcggtcaccagcacttgtcggtgttcggtgtcggcaaggcccgtagcgaaggc
gagtggcgctcgctgttccgccaactggtggctcgcggcttggccgacatcgacctggaa
ggctacggcggcttgcgcttgagtgacagttgccggccgctgctcaagggcgaagtctcc
ctggagctgcgccgcgatctcaagccgcaaaccgcggccaagagcaccagccaggccagc
caactggtccggggcgaagagcgcgagcagtgggaagcgctgcgggcgttgcgccgcaag
ctggcggaagagcacggcgtaccgccctatgtcatcttccctgattcgaccttgctggaa
atgctccgcagccagcctgggtccatggccgagatggctcgggtcagcggtgtcggtgcc
cgcaagctggagcgctatggcgcggcgttcctcgaggtgctgggcggaactgccgaggcg
ccgaaggtggttgccgatattcgtcatgaactgatcaccctggcccgtgccggcatgact
ccggtgcagatcgccggtcagttgcaatgcaccgaaaagaacgtctacaccctgctcgcc
gaagcgatcggcaagcagcaattatccctggagcaggcgctggatttgcccgaggacttg
ctgggggaaatccaggacgcgttcctcgatggcgaaggcgagttgccgcccgtggctgag
gtgatcgagttgttcgccggccgggtgcccgagggcgtgttgtactgcgtgcgtgcggcg
ctgcaatcggagttcgagatttaa
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