Pseudomonas piscis: QL104_08555
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Entry
QL104_08555 CDS
T09652
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ppii
Pseudomonas piscis
Pathway
ppii02020
Two-component system
ppii02025
Biofilm formation - Pseudomonas aeruginosa
ppii02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QL104_08555
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QL104_08555
09142 Cell motility
02040 Flagellar assembly
QL104_08555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppii03000
]
QL104_08555
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppii02035
]
QL104_08555
Transcription factors [BR:
ppii03000
]
Prokaryotic type
Helix-turn-helix
Other families
QL104_08555
Bacterial motility proteins [BR:
ppii02035
]
Flagellar system
Flagellar assembly proteins
Others
QL104_08555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
GAAD
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WMN19448
LinkDB
All DBs
Position
1805503..1806978
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCASHDWQQAVGSLSSSREVICVLIGTV
NAPGALLGLLKTLSTWDEFLPVLLMGENSSVELPEDQRRRVLSSLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQGVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHAPD
FSATAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgttcgccgccgcgatctg
gcggtgattttaaattttctcggtgaagaaaatttaccctgcgctagccatgactggcag
caggctgtcggctctctgtcttctagtcgagaagtgatctgcgtcctcatcgggactgta
aatgctcctggtgcgcttctgggcttgttaaagacactctcgacctgggatgagttcctt
ccagttttgctgatgggcgaaaattcttctgtcgagctgcccgaagaccagcgtcgccgg
gtgttgtctagcctggagatgcctcccagctacagcaagctgctcgactcgctgcatcgg
gcccaggtctatcgtgagatgtacgaccaggcgcgtgagcgcgggcgtcatcgcgaaccc
aatctgtttcgtagcctggtcggcaccagccgggcgatccagcatgtccggcagatgatg
cagcaggtggcggataccgatgccagcgtgctgatcctgggtgaatcgggtactggcaag
gaagtagttgcacgcaacttgcactatcactccaagcgccgcgacgcgcccttcgtaccg
gtcaattgcggggcgattcctgccgagttgctggaaagcgagctgttcggccatgagaag
ggcgccttcaccggggccatcaccagtcgtgctgggcgtttcgagttggccaacggcgga
accctgttcctcgacgagatcggcgacatgccgctgccgatgcaggtcaagctgttgcgc
gtgctgcaggagcgcaccttcgagcgcgtgggcagcaacaagacccagggcgtcgacgtg
cgcatcatcgcggcgacccacaagaacctggaaagcatgatcgaggtgggcagtttccgt
gaggacctgtactaccgtctcaatgtgttccccatcgaaatggcgccgttgcgtgagcgg
gtggaagatattccgctgctgatgaacgaattgatttcgcgcatggagcacgaaaagcgc
ggttcgatccgtttcaattccgctgccatcatgtccctgtgccgccatggctggccgggc
aacgtccgcgagctggccaacctggtggagcgcatggcgatcatgcatccctatggggtg
atcggcgtggtcgagctgccgaagaagtttcgctacgtcgatgacgaagacgagcaactg
gtggacagcctgcgtagcgacctggaagagcgagtggcgatcaacggccatgcgccggac
ttctccgccaccgccatgctgccgcccgaggggctggacctcaaggattacctcggcagc
ctggaacagggcctgatccagcaggcgctggacgatgccaacggcatcgtggcgcgcgcc
gccgagcgcttgcgtattcgtcgtaccaccctggtggagaagatgcgcaagtacggtatg
agtcgtcgtgaaggggatgagcaggcggatgattga
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