Pseudomonas piscis: QL104_09620
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Entry
QL104_09620 CDS
T09652
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii00071
Fatty acid degradation
ppii00280
Valine, leucine and isoleucine degradation
ppii00310
Lysine degradation
ppii00362
Benzoate degradation
ppii00380
Tryptophan metabolism
ppii00410
beta-Alanine metabolism
ppii00640
Propanoate metabolism
ppii00650
Butanoate metabolism
ppii00907
Pinene, camphor and geraniol degradation
ppii00930
Caprolactam degradation
ppii01100
Metabolic pathways
ppii01110
Biosynthesis of secondary metabolites
ppii01120
Microbial metabolism in diverse environments
ppii01200
Carbon metabolism
ppii01212
Fatty acid metabolism
Module
ppii_M00087
beta-Oxidation
ppii_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QL104_09620
00650 Butanoate metabolism
QL104_09620
09103 Lipid metabolism
00071 Fatty acid degradation
QL104_09620
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QL104_09620
00310 Lysine degradation
QL104_09620
00380 Tryptophan metabolism
QL104_09620
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QL104_09620
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QL104_09620
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QL104_09620
00930 Caprolactam degradation
QL104_09620
Enzymes [BR:
ppii01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QL104_09620
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QL104_09620
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QL104_09620
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
UDPG_MGDP_dh_N
2-Hacid_dh_C
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
WMN19646
LinkDB
All DBs
Position
2015335..2017479
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AA seq
714 aa
AA seq
DB search
MTDAIRYEKGQDQIVVLTIDMPGQSANTMNAAYRDAMAATLARLQAEQADIAGVIVTSAK
KTFFAGGDLNELIKVGKPQAQAFYDMVLALKAQLRALETLGKPVVAAINGAALGGGWEIC
LACHYRVALDDKSLQVGLPEVTLGLLPGGGGVVRMVRMLGLEKALPYLLEGKKVRARQAL
QAGLVNELAGDRDELLAKARAWIASNPTAKQPWDVKGYQIPGGTPSNPKVAQMLAIAPSI
LRTKTQGCFPAPEKILCAAVEGAQVDFDTAQLIEARYFTELTTGQVAKNMIGTFWFQLNE
INAGGSRPQGVAPQATRRVGVLGAGMMGAGIAYVSAVAGIEVVLKDVSREAAEKGKAHSA
ALLEKKVGRGQLSAEQRDATLARILPTAEDADLAGCDLIIEAVYEDRELKAKVSKAAQQV
VGAQAVIASNTSTLPITGLASAVPNPDKFIGLHFFSPVEKMPLVEIIKGAKTSDETLARG
FDFVQQIKKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGIAAPMIETEARKAGMPVGPL
AISDEVSLSLMSHIRLQTTKDLQAEGKPAIEHPAFAVIDLLLNEYKRAGKAAGGGFYDYP
AGGQKHLWPQLRTRFYKADGQISPQDVRDRLLFIQAIETVRCVEEGVLQSTADANVGSIF
GIGFAAWSGGALQFINQYGVQDFVARAQYLSRQYGERFNPPDLLLEKARQGQLF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccatccgttacgaaaaaggccaggaccagatcgtggtcctgaccatcgac
atgccgggccagagcgccaataccatgaatgcggcctaccgcgacgccatggccgccacc
ctggcccggctgcaggccgagcaagccgacatcgccggggtgatcgtcacttcggcgaag
aaaaccttcttcgccggcggcgatctcaacgagttgatcaaggtcggcaaaccccaggcc
caggccttctatgacatggttctggccctcaaggcccaactgcgggcgctggagaccctg
ggcaagccggtggtggcggcaatcaacggcgcggccctgggcggcggttgggaaatctgc
ctggcttgccattaccgcgtggccctggacgacaagtcgctgcaggtaggcctgccggaa
gtcaccctgggcctgctgcctggcggcggcggggtagtgcgcatggtgcgcatgctgggc
ctggagaaggctttgccgtatctgctcgagggcaagaaggtccgggcgcggcaggcgctg
caggcgggcctggtgaatgagctggctggcgatcgcgacgagttgctggccaaggcccgg
gcctggatcgccagcaacccgacggccaagcagccctgggatgtgaagggctaccagatt
cccggcggcaccccttcgaacccgaaagtggcgcagatgctggccatcgctccttcgatc
ctgcgcaccaagacccagggctgcttccccgcaccggagaagatcctctgtgccgcggtc
gagggcgcccaggtggacttcgataccgcccagttgatcgaggctcgctacttcaccgag
ctgaccaccggccaggtggcgaagaacatgatcggcaccttctggttccagctcaatgaa
atcaacgccggcggctcgcggccccagggcgtggcgccccaggcgacccgcagggtcggg
gtgctgggcgccgggatgatgggcgcaggcatcgcctatgtcagtgccgtggcgggcatc
gaggtggtgctcaaggatgtcagccgcgaggcggcggagaagggcaaggcccattccgcg
gccctgctggagaagaaggtcggccgtgggcaactgagcgccgaacagcgcgacgcgacc
ctggcacgcatcctccccaccgccgaagatgccgacctggccggttgcgacttgatcatc
gaggcggtctacgaggatcgcgagctcaaggccaaggtctccaaggcggcgcagcaggtg
gtcggtgcgcaggcggtgatcgcctccaatacctcgaccctgcccatcaccgggctggcc
agcgcggtgcccaatccggacaagttcatcggcctgcatttcttcagcccggtggaaaag
atgccgctggtggagatcatcaagggcgccaagaccagtgacgagaccctggcccgaggg
ttcgatttcgtccagcagatcaagaagaccccgatcgtggtcaacgatagccgcggcttc
ttcacctcccgggtattcggcaccttcaccaacgaaggcattgccatgctcggcgaaggc
atcgccgcgccgatgatcgagaccgaggctcgcaaggccgggatgcccgtgggtccgctg
gcgatctccgacgaagtgtccctgagcctgatgagccacattcgcctgcaaaccaccaag
gacctgcaagccgaaggcaagcctgccatcgaacacccggcattcgccgtgatcgacctg
ctgctcaacgagtacaagcgcgcgggcaaggccgccggtggcggtttctacgactacccg
gccggtggccagaaacacctgtggccgcagttgcgtacgcgcttctacaaggccgacggg
cagatctcgccccaggacgtgcgcgaccgcttgttgttcatccaggccatcgagaccgtg
cgctgcgtggaagagggcgtgttgcaatccacggccgacgccaacgtcggttcgatcttc
ggcatcggtttcgcggcctggagtggcggcgcgctgcagttcatcaaccagtacggggtg
caggatttcgtcgcccgcgcccagtacctgtcacgtcagtacggcgagcgcttcaacccg
ccggacctgctcctggagaaggcgcgccagggccagttgttctga
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