Pseudomonas piscis: QL104_10235
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Entry
QL104_10235 CDS
T09652
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii00071
Fatty acid degradation
ppii00280
Valine, leucine and isoleucine degradation
ppii00310
Lysine degradation
ppii00362
Benzoate degradation
ppii00380
Tryptophan metabolism
ppii00410
beta-Alanine metabolism
ppii00640
Propanoate metabolism
ppii00650
Butanoate metabolism
ppii00907
Pinene, camphor and geraniol degradation
ppii00930
Caprolactam degradation
ppii01100
Metabolic pathways
ppii01110
Biosynthesis of secondary metabolites
ppii01120
Microbial metabolism in diverse environments
ppii01200
Carbon metabolism
ppii01212
Fatty acid metabolism
Module
ppii_M00087
beta-Oxidation
ppii_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QL104_10235 (fadB)
00650 Butanoate metabolism
QL104_10235 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QL104_10235 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QL104_10235 (fadB)
00310 Lysine degradation
QL104_10235 (fadB)
00380 Tryptophan metabolism
QL104_10235 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QL104_10235 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QL104_10235 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QL104_10235 (fadB)
00930 Caprolactam degradation
QL104_10235 (fadB)
Enzymes [BR:
ppii01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QL104_10235 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QL104_10235 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QL104_10235 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QL104_10235 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WMN19766
UniProt:
A0ABY9NN19
LinkDB
All DBs
Position
2160073..2162220
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLGVPTVAAINGIALGGGLE
MCLAADYRVMSASAKIGLPEVKLGIYPGFGGTVRLPRLIGTDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLKDAALTLLKGAISGEFDYKAKRQPKLEKIKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KRKAKAYDEIAQDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVEKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEAQVK
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAQFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaattg
cgtcaggctgttgacaccatcaaggcagatgcgtcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagtttgtcgacaacttcaagctg
ccggatgcggagctggtggcaggcaacctcgaagccaacaagatcttcagcgatttcgaa
gaccttggcgtgcctaccgttgccgccatcaacggcatcgccctgggcggcggcctggaa
atgtgcctggcagcggactaccgcgtgatgtccgccagcgccaagatcggcctgccggaa
gtcaagctgggcatttacccgggcttcggcggcaccgtgcgcctgccgcgcctgatcggt
accgacaacgccatcgaatggatcgccgccggcaaggaaaaccgtgccgaagacgcgctg
aaggttggtgctgtggatgcagtggtggcccctgagaagctcaaggatgctgccctgacc
ctgctcaagggcgccatttccggcgagttcgactacaaggccaagcgccagccgaagctg
gagaagatcaagctcaacgccatcgagcagatgatggccttcgaaaccgccaagggtttc
gtggccggccaggcgggtcctaactacccggctccggtcgaggcgatcaagaccatccag
aaggccgccaacttcgggcgcgacaaggccctggaagtggaagccgcaggcttcgtcaag
ctggccaagacctcggccgcccagagcctgatcggcttgttcctgaacgaccaggagctc
aagcgcaaggccaaggcctacgacgagatcgcccaggacgtgaagcaggccgctgtactt
ggcgccggcatcatgggtggcggcatcgcctaccagtcggcctccaagggcacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcagggcctggcggaagccgcgaaactg
ctggttggccgcgtcgagaagggccgcatgaccgcagcgaagatggccgaagtgctcaac
ggcattcgtccgaccctgtcctacggtgacttcggcaacgtcgacctggtggtcgaagcc
gtggtcgagaaccccaaggtcaagcaagccgtactggctgaagtcgaagcccaggtcaag
gaagatgcgatcctggcgtccaacacctcgaccatttccatcagcctgttggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaaccccgtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgagctggccgtcgccaccaccgttgcc
tatgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgctggcgtggac
ttcgtacgcatcgacaagatcatggagaagttcggctggccaatgggaccggcctacctg
atggacgtggtcggcatcgacaccggccaccatggtcgcgacgtgatggccgaaggcttt
ccggatcgcatgaaggacgaccgccgttcggctatcgacgtgctctacgaggccaagcgc
ctgggccagaagaacggcaagggtttctacgcctacgagaccgacaagcgcggcaagcag
aagaaggtcgccgatccgtcggtgctggaagtgctcaagccgatcgtctacgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgagacggctgccgaagccgacatgggcctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgattccatcggtgtc
gcccagttcgttgccctggccgaccagtacgccgatctgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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