Pseudomonas piscis: QL104_10780
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Entry
QL104_10780 CDS
T09652
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ppii
Pseudomonas piscis
Pathway
ppii03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QL104_10780 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppii03400
]
QL104_10780 (uvrB)
DNA repair and recombination proteins [BR:
ppii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QL104_10780 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QL104_10780 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
WMN19863
UniProt:
A0ABY9NPR4
LinkDB
All DBs
Position
2262564..2264579
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIQQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDGIKEELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEGVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPL
VEVRPALTQVDDLLSEITKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADNITGSMQRAIGETERRRDKQLAFNQANGITPKGVVKDITDIMEGATV
PGSRSKKRKGMAKAAEESARYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRDE
ISKLRERLLNV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttccagctcgttacccgtttccagcctgccggcgaccagccggaggccatc
cgcctgatggtcgaaggcatcgaggccggcctggcgcaccagaccctgctcggtgtgacc
ggttcaggcaagaccttcagcatcgccaacgtcatccagcaagtgcagcggccgaccctg
gtactggccccgaacaagaccctggcggcgcagttgtacggcgagttcaaggcgtttttc
ccgaacaacgcagtggagtacttcgtttcctactacgactactaccagcccgaagcctat
gtgccgtcctccgataccttcatcgagaaggatgcttcgatcaacgaccatatcgaacag
atgcgcctgtcggcgaccaaggcgctgctggagcgcaaggacgcgatcatcgtcaccacg
gtgtcctgcatctatggcctgggcagccccgaaacctacctgaagatggtcttgcacgtg
gatcgcggcgacaagctcgaccagcgtgccttgctgcggcgcctggcggacctgcaatac
acccgcaacgacatggatttcgcccgcgcgaccttccgggtccgcggcgacgtgatcgat
atctacccggcggaatccgacctggaagcgatccgcatcgagttgttcgacgacgaagtg
gaaagcatcagtgccttcgacccgttgaccggcgaggtgatccgcaagctgccacgcttc
accttctatcccaagagccactacgtgaccccgcgcgagaccctgctggaggccgtcgat
ggaatcaaggaggagctgcaggagcgcctggagtacctgcgttccaacaacaagctggtg
gaagcccagcgcctggagcagcgcactcgcttcgacctggagatgatcctcgagctgggc
tactgcaacggtatcgaaaactactcgcgctacctgtccgggcgtccggccggggcgccg
ccgccgaccctgtatgactacctgccgcccgatgccctgttggtgatcgacgagtcccat
gtcagcgtgccccaggtcggcgcgatgtataagggtgaccgttcgcgcaaggaaaccctg
gtggaatatggcttccgcctgccttcggcgctggataaccggccgatgcgtttcgacgaa
tgggaaggcgtcagcccgcagaccatcttcgtctccgccactcccggcaactacgaggcc
gagcacgccggtcgggtggtggagcaggtggtacgccccaccggcctggtggaccccctg
gtggaggtgcgtccagcgttgacccaggtcgacgacctgctgtcggaaatcaccaagcgc
gtggccctggaggagcgggtgctggtgaccaccctgaccaagcgcatggccgaggatctc
accgactacctggctgaccacggcgtccgtgtgcgctacctgcactcggacatcgatacc
gtggagcgggtggagatcattcgcgacctgcgcctgggtactttcgacgtgctggtgggg
atcaacctgctgcgcgagggcctggacatgcccgaggtgtcgctggtggcgattctcgat
gccgacaaagaaggtttcctgcgctccgagcgctcgctgatccagaccatcggccgcgct
gcgcgtaacctcaatggcaaggcgatcctctacgccgacaacatcaccggctccatgcag
cgcgccatcggcgagaccgagcgccggcgcgacaagcaactggctttcaaccaggccaat
ggcatcaccccaaagggggtggtcaaggacatcaccgacatcatggaaggtgccaccgtg
cccggttcgcgcagcaagaagcgcaagggcatggccaaggccgcggaggagagcgctcgc
tacgaaaacgagctgcgttcgccgagcgagatcaccaagcgcatccgccagctcgaggaa
aagatgtaccagttggcccgggacctggagttcgaggcggcagcccagctgcgggacgag
atcagcaagctgcgtgagcgcctgctcaacgtctga
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integrated database retrieval system
