Pseudomonas piscis: QL104_11980
Help
Entry
QL104_11980 CDS
T09652
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppii
Pseudomonas piscis
Pathway
ppii01501
beta-Lactam resistance
ppii02020
Two-component system
Module
ppii_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QL104_11980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QL104_11980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppii02000
]
QL104_11980
01504 Antimicrobial resistance genes [BR:
ppii01504
]
QL104_11980
Transporters [BR:
ppii02000
]
Other transporters
Pores ion channels [TC:
1
]
QL104_11980
Antimicrobial resistance genes [BR:
ppii01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
QL104_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
WMN20069
LinkDB
All DBs
Position
2524607..2525929
Genome browser
AA seq
440 aa
AA seq
DB search
MPHVSRSLSPLLLPLLGCLPWTTQAAEPGFIEDSHLSVLARNYYFNRSIQDGRADRKDWT
QGFIGRFSSGFTQGSVGVGVDAFAFLGLKLDASGGKTGTYNLPIHDNGKPADEYSKAGAA
LKIKVSNSVLRYGEQSVDTPVFAIGHNRLIPQTATGFALDSQELDRLKLQAGHFTSATGH
VTTNSSGDLWAFYSGVTTPSVDYAGGQYQFTRDLGASLYVARFQDIWNQYYANLNGRTDL
GEGQQAGFDLNLYRTLDTGRSKAGAINNTTLGAAVFYGLGAHRMTLALQNVDGNTLFDYL
GVGDLDRNGRNGRDQGASIYLPNSVQYSDFNGPNERSWQLRYDLSLASYGVPGLNLMTRY
LRGSGIDGTHTPAGSAYAGMYGKDGVHREINVEARYVVQSGPWKELSLRLRQTWHRANVA
QGEGNMDEFRLITDYPIDIF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgccccatgtctcgcgttctctatcaccattgctgttgccgctattgggctgcttgccc
tggacaacccaggctgccgagccgggcttcatcgaggacagtcacctgagcgtgctggcc
cgcaactactatttcaatcgcagcattcaggatggtcgcgcggatcgtaaggattggacc
cagggttttatcgggcgcttcagttcggggttcacgcagggctccgttggcgtgggcgtg
gatgcctttgcctttctgggactcaagctggatgcctccggcggcaagaccggcacctac
aatttgccgatccacgacaacggcaagccggcggacgaatactccaaagccggtgccgcg
ctcaagatcaaggtctccaacagtgtgctgcgctatggcgagcaatcggtggataccccg
gtgttcgctatcggtcacaaccgcttgatcccgcaaaccgccaccggctttgccctggat
agccaggagctggaccggctcaagctgcaggccgggcacttcacatcggccaccggtcat
gtcaccaccaacagcagtggtgatctgtgggcgttctatagcggtgtcaccaccccttcg
gtggactacgccggtggccagtaccagttcacccgggacctgggtgccagcctctacgtt
gcgcgcttccaggacatctggaaccagtactacgccaacctcaacggccgcaccgacttg
ggggaagggcagcaggccggcttcgacctcaacctgtatcgcaccctcgacactggccgc
tccaaggccggggccatcaacaacaccacgctgggcgctgcggtgttctatggcctgggc
gctcaccgtatgacccttgccttgcagaacgtcgatggcaacaccctgttcgactacctg
ggggttggtgacctggatcgcaacggtcgcaacggccgcgaccagggcgcctcgatctac
ctgcccaactcggtgcagtactcggacttcaacgggcccaacgagcgctcctggcaactg
cgctacgacctctccctggccagttatggcgtgccgggcttgaacctgatgacccgttac
ctgcggggctccgggatcgacggcacgcacaccccggccggcagcgcctacgccgggatg
tatggcaaggatggggtgcaccgggagatcaacgtcgaggcacgctatgtggtgcagagc
ggcccctggaaggagctgagcctgcgcctgcgccagacctggcaccgggcgaatgtggcc
cagggcgagggcaatatggatgagttccggctgatcaccgactatccgatcgatattttc
tga
DBGET
integrated database retrieval system
