Pseudomonas piscis: QL104_12120
Help
Entry
QL104_12120 CDS
T09652
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppii
Pseudomonas piscis
Pathway
ppii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QL104_12120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppii03021
]
QL104_12120
Transcription machinery [BR:
ppii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QL104_12120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_3
HTH_31
HTH_23
GerE
HTH_11
HTH_Tnp_4
Sigma70_ECF
HTH_24
PhyR_sigma-like
Xre-like-HTH
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WMN20097
UniProt:
A0ABY9NP34
LinkDB
All DBs
Position
2551923..2552444
Genome browser
AA seq
173 aa
AA seq
DB search
MPADDLTLSCAVNDLYLDHHGWLQGWLRRRLGNTCDAADLAQDTFVRVLKARNALEIREP
RPYLSRIANGLLIDLFRRRSLEQAYLEALAQVPEAEHPSPEEQGMLLQALMEIDRLLDGL
GAKVKQAFLLSQCDGLTYEQIAMRLGVSVRSINNYMAKAMEHCCLMQMRMQRG
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgacttaaccctgagctgtgccgtcaacgacctctatctcgaccatcat
ggctggctccagggctggctgcgccgccgcctgggcaacacctgcgatgcggcggacctc
gcccaggacaccttcgtgcgggtgctcaaggcgcgcaatgccctggagatccgtgagcct
cggccctatctgtcgcggatcgccaatggcttgctgatcgacctgttccgtcgtcgctcc
ctggagcaggcctatctcgaggccctggcccaggtgcccgaggccgagcacccctcgcct
gaagagcagggcatgctgctgcaggccctgatggagatcgaccgcttgctcgatgggctg
ggggccaaggtcaagcaggccttcctgctgtcccagtgcgatggcctgacctatgagcag
atcgccatgcgcctgggggtgtcggtacgcagcatcaacaactacatggccaaggcgatg
gagcattgctgcctgatgcagatgcggatgcaacgcggatga
DBGET
integrated database retrieval system
