Pseudomonas piscis: QL104_12700
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Entry
QL104_12700 CDS
T09652
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppii01002
]
QL104_12700
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppii01011
]
QL104_12700
Peptidases and inhibitors [BR:
ppii01002
]
Cysteine peptidases
Family C82
QL104_12700
Peptidoglycan biosynthesis and degradation proteins [BR:
ppii01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
QL104_12700
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WMN20207
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Position
2673201..2674772
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AA seq
523 aa
AA seq
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MFKKHACYLSLWLLAAPLVALAEDLPQVPASPLPGALAQPVLACPALAPRLDLPTQQLLQ
AFYREQGEQPVWSTGARLEQLQAQLAGLVDDGLDPGHYRLPPASAGGDGLCRDIDISHQY
LQALQDLHYGRLSQTRFEPLWRAQPLPDDRQGVLLAITGPGLDDLGAVFERARPNLEQYR
NLRRAYAHERQQPLPHWQDVAGGPLLRPHMEDKRVPDLALRLYHGGFLASPKVNADNIYS
DDLVSAVKSFQLSHSLQSDGVVGAGTLKEMNVSPALRREQLRINLERLRWLARDFEPNIV
LVNVAAAQLSFYQHDALVWQTRTQVGRAERQTPLLKSQVTRLTLNPTWTVPPTILKEDKL
PQIRRDQGFLNRQNLQVLDANGQPLAAEDIDWDRPGNILLRQGAGPRNPLGRIAIRFPNP
FSVYLHDTPSQALFSKGPRAFSSGCVRVEQALQLRDWLLSPAERLRTNDLLATGLTHEFR
LAKPVPILLTYWTVQADSHGQLLYAPDIYGHDPQLSTALGSKI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaaacacgcatgttacttgagcttgtggctgctcgctgcgccattggtcgcg
ctggccgaggacttgccccaggtgccggcgagccccctgccgggggcgctggcccagcct
gtgctggcctgcccggcactggccccgcgtctggacctgccgacgcaacaactgttgcag
gcgttctatcgcgagcaaggcgagcaaccggtgtggtcgaccggggcccgcctggaacaa
ctgcaggcgcaactggcgggcttggtcgatgacggcctggaccctgggcactatcgcctg
ccgccggcgagcgcggggggcgatggcctgtgccgcgacatcgatatcagccaccagtac
ctgcaagccctgcaggacctgcattacgggcgcctgtcgcagacccgcttcgaaccattg
tggcgagcccagccgttgccggacgatcgccagggcgtgttgctagccattaccggaccg
gggctggatgacctcggtgcggtattcgagcgggcacggcccaacctcgagcagtaccgc
aacctgcgccgggcctatgcccatgagcggcaacagcccttgccccattggcaggacgtg
gccggcggcccgctgttgcgcccgcacatggaggacaagcgcgttccggacctggccctg
cgcctgtaccacggcggtttcctggccagccccaaggtcaatgccgacaacatctacagc
gacgatctggtgagcgcggtgaagagtttccagctcagccactcgttgcagtccgacggc
gtggtgggggctggcaccctgaaggagatgaatgtcagcccggccctgcgtcgcgagcag
ttgcgcatcaacctcgaacgcctgcgttggctggcccgggacttcgagccgaacatcgtg
ttggtcaacgtcgctgcggcgcagttgagtttctaccagcacgatgcgctggtctggcag
acccgcacccaggtcggtcgcgccgagcgccagactccgttgctcaagtcccaggtcacg
cgcctgaccctgaacccgacctggacggtgccgccgaccattctcaaggaagacaagctg
ccgcagatccgccgtgaccagggtttcctcaatcgccagaacctgcaggtactggacgcc
aacggccaacccctggccgccgaggacatcgactgggatcgtccgggcaacatcctcctg
cgccagggcgccgggccgcgtaatcccctggggcgcatcgccatccgttttcccaacccg
ttctcggtatacctgcacgacacgccgagccaggcgttgttcagcaaggggccgcgggcc
ttcagctcgggctgcgtgcgggtggagcaggcgttgcagctgcgcgactggctgctcagc
ccggcggagcgcttgcgcaccaacgatttgctggccaccggcttgacccacgagttccgc
ctggccaagccggtaccgatcctgctcacctactggacggtgcaggccgacagccatggg
cagttgctgtacgcaccggacatctacggccatgatccgcagttgtccaccgccttgggc
agcaagatctga
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