Pseudomonas piscis: QL104_13630
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Entry
QL104_13630 CDS
T09652
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppii03400
]
QL104_13630
DNA repair and recombination proteins [BR:
ppii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QL104_13630
Archaeal homologous recombinant proteins
QL104_13630
BRITE hierarchy
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
AAA_15
cobW
RsgA_GTPase
MMR_HSR1
nSTAND3
AAA_22
AAA_18
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WMN20386
LinkDB
All DBs
Position
complement(2869970..2873614)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIAKENKVPDVDSDISTSDPRTLLRRGTGSGYAEVDFVGIDSRRYRARWETNRARDKA
NGKLQGSRQSLTDLDDGQLLSNQSKAEYKQLIEARLGLNFEQFTRAVMLAQSEFSAFLKA
DDKERSELLEKLTNTAIYSQLGKRAFSKAKEADEAHKALTAQASGVAPLPAEERAELDQQ
LGAARDQLKARQLQLKQLEAQHGWLKELRQWQEARHSAAEQLQEAEAEAQVLAPERLRLE
RLEQLAPQRHQFLRQVELTATLEPLQRQIEQQQAQQAQLQQQQEQRQQQVQDSSASLAQA
QEQSSAKAPLLREAFAEQGNLQRLEQELAQATQARERAEQANTQGQQDIQHLQEQQRLVA
ERLERIAGQLQHSATLAPLSEAWDAYRGRLQQLVQIGNRLNQGQAELPGLEQRAETAARQ
LGEQRSQLELLYREAGAEPQAVAEQIQLLGTLLQDNRRQQRSFEDLARLWAQQQELDQRA
QALQDKQQTAATQREELNKIGIQAKAELVMAEQALSVTQALLERQRLARSASVEELRAQL
QDDQPCPVCGSVEHPYHQPEALLQSLGRHDENEEAAARKVVDGLKEQLAELRAQVQGLIA
QQKDLLQQQEQLATQQQALAPSLQAHPLGAQLLDQDPPQRDAWLQRQLEQLQQSIGQDEQ
RQDALLTLQKDAARLQGQLQAAVDASQRAAQQLEKQREQLDADRQRLDEELGGFSQWLPG
ELLDGLRRDPAASFMQLDQQVLQRIEQLREQQDETQEQQQRQLALDKEQDRQQTRQQQLH
DARQQAEALHQQQQACQQRLAELLGTHDSAEHWQQQLEQGVEQARMAQAAAQQQAQELQQ
QLIQLAAELKAGQERCQALEAEQQQLAASIEQWRAQHPQLDDAGLQGLLELDDSQVRQLR
ERLQANDKAIEQARVLLEERQQRLEQHQAQHNGNLEAEELAQALETTSQQALADEQQVAE
LRARQSEDQRRQEANQALAQGIAQAYEQWQRWARLSALIGSAEGDKFRKIAQSYNLDLLV
HHANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLAS
MASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIAVQIQ
VSRQGNGLSTLEVK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctggccatccgcctgaagaacctggcctccctggccggcccgttcgagatc
gacttcaccgccgaacccctggccagcgccggcctgttcgccatcaccggacccaccggc
gccggcaagagcaccctgctcgacgccttgtgcctggcgctgttcggcgccgtgcctcgg
ctgaacaacatcgccaaggaaaacaaggtcccggatgtcgacagcgacatctccaccagc
gatccgcgcaccctgttgcgccggggcaccggcagcggttacgccgaggtggatttcgtc
ggcatcgacagccgtcgctaccgcgctcgctgggaaaccaaccgggcccgggacaaggcc
aacggcaagctgcaaggcagccgccagagcctcaccgacctggacgacgggcaactgctg
agcaaccagagcaaagccgaatacaagcagttgatcgaagcgcgcctggggctcaacttc
gaacagttcacccgcgcggtgatgctggcccagagcgagttcagcgccttcctcaaggcc
gacgacaaagagcgcagcgaactgctggaaaagctcaccaacacggcaatctacagccag
ctgggcaagcgcgccttcagcaaggccaaggaagccgacgaagcgcacaaggccctcacc
gcccaggccagcggcgttgccccgctgccagccgaagaacgtgccgaactggaccagcaa
ctgggcgccgcccgtgaccagctcaaggcccggcaactgcaactcaagcagctggaggcc
cagcacggctggctcaaggaattgcgccagtggcaggaggcccggcacagtgccgccgag
cagttgcaggaagccgaggcagaggcgcaggtcctggcccccgaacgcctgcgcctggag
cgcctggagcagttggcgccgcagcgccatcagttcctgcgccaggtcgaactgaccgcg
accctcgaacctctgcaacggcagatcgagcagcaacaggcgcaacaagcgcagttgcag
cagcaacaagaacaacgacagcagcaggtccaggacagtagcgccagcctggcccaggcc
caggagcaatccagcgccaaggcgccgctgctgcgcgaagcctttgccgaacaaggcaac
ctgcaacgcctggagcaggagctggcccaggccacccaggcccgggagcgcgccgagcag
gccaacacccagggccagcaggacatccagcacttgcaggaacagcaacgcctggtggcc
gagcgcctggagcggatcgccgggcaactgcagcacagcgccacccttgcgcctctgagc
gaagcctgggatgcctatcgcgggcgcttgcaacagctggtgcagatcggtaatcgcctg
aaccagggccaggcggaactgccgggcctggagcagcgcgccgaaaccgccgcccgccaa
ttgggcgagcagcggtcgcagttggagctgctgtaccgcgaagccggcgccgaaccccag
gccgtggccgagcagatccaattgctgggcaccctgctccaggacaaccgcaggcagcaa
cgctcgttcgaggacctggcccggctctgggcccagcagcaggagctggaccagcgtgcc
caggcgctgcaggacaagcaacaaaccgcggcgacccagcgcgaggagctgaacaagatc
gggatccaggccaaggccgagctggtgatggccgagcaggccctgagcgtgacccaggcc
ctgctggagcgccagcgcctggcccgcagcgccagtgtggaagagttgcgcgcgcagctg
caggacgaccaaccatgcccggtatgcggcagtgtcgagcacccgtatcaccaacccgag
gccctgctgcagagccttgggcgccatgacgaaaacgaagaagccgccgcccggaaagtc
gtggatgggctcaaggagcaactggccgaactgcgtgcccaggtccagggcctgatcgcc
cagcagaaagacctgctacagcaacaggaacaactggccacccaacaacaggccctggcc
ccgagcctgcaagcccatcccctgggcgcccagctgctggaccaggacccgccccagcgc
gatgcctggctgcaacggcagttggagcagttgcaacagagcatcggccaggacgagcag
cgccaggacgccctgttgaccctgcaaaaggatgccgcacgcctgcaaggccagttgcag
gccgccgtcgatgccagccagcgggccgcccagcaactggagaagcagcgcgagcagttg
gacgccgatcgccagcgcctggacgaagagctcggcggcttcagccagtggctgcccggc
gagctgctcgacggcttgcgccgtgacccggcggcgagcttcatgcagctggaccagcaa
gtgctgcaacgcatcgagcaactgcgcgaacagcaggatgaaacccaggaacagcagcag
cgccagctggccctggacaaggaacaagaccgccagcagacccgccagcagcaattgcac
gacgcccggcagcaggccgaggccctgcaccagcagcaacaggcgtgtcagcagcggttg
gccgagttgctgggaacccacgacagcgccgagcactggcagcagcagctggaacagggc
gtcgagcaggcccgcatggcccaggccgcggcccagcagcaagcgcaggaactgcaacag
cagctgatccagctggccgccgagctcaaggccggccaggagcgctgccaggccctggaa
gccgagcagcagcaactggccgccagcatcgagcagtggcgcgcccagcacccgcaactc
gacgacgccgggctgcaagggctgctggaactggacgacagccaggtccgccaactgcgc
gagcgcctgcaggccaacgacaaggccatcgagcaggcccgggtactgctcgaggagcgc
cagcaacgcctggagcagcaccaggcccagcacaacggcaacctggaagccgaggagctg
gcccaagccctggaaaccacttcgcaacaagcgctggccgacgaacagcaagtggccgag
ctgcgcgcccggcagagcgaagatcaacgccgccaggaggccaaccaggccctggcccag
ggcatcgcccaggcgtacgagcaatggcagcgctgggcccggctcagcgccctgatcggc
tcggccgagggcgacaagttccgcaagatcgcccagtcctacaacctcgacctgctggtg
caccacgccaacgcacaactgcgccagctggtgcggcgttatcgcctcaagcgcggcggc
agcatgctcggcctgctggtgctggacaccgagatgggcgacgaactgcgctcggtgcat
tcgctgtccggcggcgagaccttcctggtgtccctggcgctggccctggggttggcgtcc
atggcctccagcaccttgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctc
gaccccgaatcgctacaactggccatggacgccctcgacggcctccaggcccagggccgc
aaggtcggggtgatctcccacgtgcaggagatgcacgagcgcatcgcggtgcagatccag
gtcagccgccagggcaacggcctgagcaccctggaggtgaaataa
DBGET
integrated database retrieval system
