Pseudomonas piscis: QL104_13635
Help
Entry
QL104_13635 CDS
T09652
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppii03400
]
QL104_13635
DNA repair and recombination proteins [BR:
ppii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QL104_13635
Archaeal homologous recombinant proteins
QL104_13635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Flavi_M
Motif
Other DBs
NCBI-ProteinID:
WMN20387
UniProt:
A0ABY9NQB5
LinkDB
All DBs
Position
complement(2873611..2874855)
Genome browser
AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLKHEQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQQPGLSIVMIAGNHDSGSRIELPAPLMRRLRAHALGRVLWLDDGQLDA
GRLLLPLTDASGKIAAWCLALPFLRPAEVTGRHLGEDYLKGIAQVHEWLIAAAEERRQPG
QALIAVSHAHMAGGSVSEDSERSLVIGNAEALPASLFGPQISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIDYKHQILDIRLDGEQLLSVEPRLIPRAVNLQRLGPAPLGEILAQL
GALPDIDLLAEEQRQPWLEVRIRLDEPQPDLRQQLENALQGKAVRLVRIAAEYAGSASGD
GEDGMAGLIELDQLSPEELFRRAWRDAYANEADEQTLKDFALLLQDVQHEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccagaacctccatggccaggagcgc
gacttcgaacacgcctgcttcctcgagtggctgttgcgccagctcaagcacgagcagccc
gacgcgctgctgatcgccggcgatatcttcgataccgtcaacccaccggtcaaagcccag
gaacggctctacgacttcatcgtcagcgcccacgagcagcaaccgggcctgagcatcgtg
atgatcgccggcaaccacgactccggctcgcgcatcgaactgccagcgccattgatgcgg
cgcctgcgcgcccatgccctgggccgggtgctgtggctcgatgacggccagctggatgcc
gggcgcctgctgctaccgctgaccgatgccagcggcaagatcgcggcctggtgcctggcc
ctgcccttcctgcggccggcggaagtcaccggtcgccatttgggcgaggactacctcaag
ggcatcgcccaggtccatgagtggttgatcgccgcggccgaggaacgccgccaaccgggc
caggcgctgattgccgtaagccacgcgcacatggccggcggctcagtctccgaggactcc
gaacgcagcctggtgatcggcaacgccgaggccctgccggccagcctgttcggcccgcag
atcagctacgtggccctggggcacctgcacaagccacagaaggtcaacggcgaggaacgc
atccgctacagcggctcgccgatcccgctgtcgttctccgagatcgactacaagcaccag
atcctcgacattcgcctggacggtgagcagttgctcagcgtcgagccgcggctgatcccg
cgggccgtcaacctgcaacgcctgggcccggcaccgctgggcgagatcctggcccagctc
ggcgccctgccggacatcgacctgctggccgaggagcagcgccagccctggctggaagtg
cgcatacgcctggacgaaccgcaaccggacttgcgccagcagctggaaaacgccttgcaa
ggcaaggccgtgcgcctggtgcggatcgccgccgaatacgccggtagcgccagtggcgac
ggcgaggacggcatggccgggctgatcgaactggatcaactgagcccagaagaactgttc
cgccgggcctggcgcgacgcctacgccaatgaagcggatgaacagaccctcaaggatttc
gccctgctgttgcaggacgtccagcacgaaggtgagcagccatga
DBGET
integrated database retrieval system
