Pseudomonas piscis: QL104_14775
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Entry
QL104_14775 CDS
T09652
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QL104_14775
09124 Replication and repair
03420 Nucleotide excision repair
QL104_14775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppii03021
]
QL104_14775
03036 Chromosome and associated proteins [BR:
ppii03036
]
QL104_14775
03400 DNA repair and recombination proteins [BR:
ppii03400
]
QL104_14775
Enzymes [BR:
ppii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
QL104_14775
Transcription machinery [BR:
ppii03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QL104_14775
Chromosome and associated proteins [BR:
ppii03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
QL104_14775
DNA repair and recombination proteins [BR:
ppii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QL104_14775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
ResIII
HBB
Motif
Other DBs
NCBI-ProteinID:
WMN20605
LinkDB
All DBs
Position
3166097..3168382
Genome browser
AA seq
761 aa
AA seq
DB search
MSYRIAVRALCEFSAKHGDLDLRFTPSPTAQEGMQGHRTVAARRNPEYQSEVSLEGQHGP
LLVKGRADGYDPRQNLLEEIKTFRGDLSRMPDNHRQLHWAQAKVYGWLLCQSRQLPGIRV
ALVYFDIHSEEETALVQEYSAGQLQAFFEQQCAIFLDWAQQQLQHRADRDRACRELAFPH
GQFRPGQRHLAESVYKAVSTGRCLLAQAPTGIGKTLGTLFPMLKAMAPQQLDKVLFLTAK
TPGRQLALDAARVLFAEHAGLPLRVLELVARDKACEYPDNACHGESCPLAKGFYQRLPAA
RQAASQVPLLDRQALRQLALEHQVCPYYLSQEMARWSDLVVADYNYYFDFTALLFGLAQA
DQWRLAVLVDEAHNLVERGRGMYSASLDQQQLAQVRKNAPQALKSPLQRLNREWNALHKD
QVAPYQAHGCLPGAWLKALGLCVAAIGDYFNEHPQGLDAAVQGLYFELLQFARVAELFDE
QPFIFDVSKRTLNARRSLSRLSLRNVVPAALLRPRLEAARSVVLFSATLEPQHYYRDLLG
VPDSAVWLDVESPFAAAQLDVHIVSQISTRYARRQASLVPIVELMAGQFAARPGNYLAFF
SSFEYLQQVAELLARKHPEIPIWLQSRGMDESLREEFLQRFQAEGRGIGFAVLGGAFGEG
IDLPGSRLIGAFVATLGLPQLNALNEQMKQRMGALFGAGYDYTYLYPGLQKVVQAAGRVI
RSQADRGVLMLIDDRFAEPRVRRLLPRWWAIAEEETAQDCQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatcgcatcgcggtgcgtgccttgtgcgagttcagcgccaagcacggggacctg
gacctgcgcttcactccatcgcccaccgcccaggagggtatgcaggggcatcgcacggtg
gccgcccggcgcaatcccgagtaccagagcgaagtatccctggagggccagcatggcccg
ttgctggtcaagggccgggccgatggctacgacccccggcaaaacttgctggaggagatc
aagacctttcgcggcgacttgtcacgcatgcccgacaaccatcggcaactgcactgggcc
caagccaaggtctatggctggctgctgtgccagagtcggcagttgccgggcatccgcgtg
gcactggtgtatttcgacatccatagcgaagaggaaaccgccctggtacaggagtacagc
gccgggcagttgcaggcgttcttcgagcagcaatgcgcgatcttcctggattgggcgcaa
cagcagttgcagcaccgcgcagaccgggaccgggcctgtcgcgagctggctttcccccat
gggcagttccgccccggccagcgccacttggccgagtcggtgtacaaggcggtcagtacc
ggtcgctgcctgttggcccaggctcccaccggtatcggcaagaccctgggcacgttgttc
cccatgctcaaggccatggccccgcagcaactggacaaggtactgttcctcaccgccaag
accccgggccgacaattggccctggatgccgccagggtgctgttcgccgagcatgccggg
ttgccgctgcgggttctggagctggtggcccgggacaaggcctgcgagtacccggacaac
gcctgtcatggcgagtcctgcccattggccaagggtttctatcagcgtctgccggcggcc
cgccaggcagccagccaggtgccattgctggatcgccaggcgttgcgccagctggccctg
gaacatcaggtctgcccctattacctgagccaggaaatggcccgctggagcgacctggtg
gtggccgactacaactactacttcgatttcacggccttgttgttcggcctggcccaggcc
gaccagtggcgactggcggtgttggtggacgaagcccacaacctggtggagcgcggtcgc
ggcatgtacagcgccagcctcgaccagcagcaactggcccaggtgcgcaagaatgcgccg
caggccctgaagagccccttgcagcgcctgaatcgcgagtggaatgccctgcacaaggac
caggttgcgccgtaccaggcccatgggtgcttgcccggcgcctggctcaaggccctgggg
ttgtgcgtggcggccatcggcgactacttcaatgaacacccccagggcctggacgcggct
gtgcaggggttgtatttcgagctactgcagtttgcccgggtggcggagctgttcgacgag
cagcccttcatcttcgatgtcagcaaacgcaccttgaacgcccggcgcagcctgtcgcgc
ctgagcctgcgcaacgtggtgccggcggcgctgctgcgcccgcgcctggaggcggcccgc
agcgtggtgctgttttccgcgacgctcgaaccccagcattactatcgcgacctgttgggt
gtacccgatagtgccgtgtggctggatgtcgaatcgccgttcgcggccgcgcaactggat
gtgcacatcgtcagccagatctcgacccgttatgcccggcgccaggcctcgctggtgccc
atcgtcgagttgatggccggccagttcgcggctcgtcctggcaactacctggcgttcttc
agcagtttcgaatacttgcagcaggtggccgagcttttggcccgcaagcatccggaaatt
cccatctggctgcagtcgcgaggcatggacgaaagcttgcgggaggagtttctgcagcgg
ttccaggccgaggggcggggcataggtttcgccgtactcggcggtgcgttcggcgaaggc
atcgacttgccgggttcgcgcttgatcggggcttttgtcgccaccctgggcttgccccag
ctcaatgccttgaacgagcagatgaagcagcgcatgggcgcgttgttcggtgcaggttat
gactacacctacctctaccccggcttgcagaaggtggtgcaggcggcagggcgggtgatc
cgcagccaggccgatcgaggggtgctgatgctgatcgacgatcgttttgccgagccacgg
gtgcgtcggttgttgccgcgctggtgggctatcgccgaagaggaaacggcgcaggactgc
cagtag
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integrated database retrieval system
