KEGG   Pseudomonas piscis: QL104_15045
Entry
QL104_15045       CDS       T09652                                 
Name
(GenBank) transcriptional regulator
  KO
K18294  TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
ppii  Pseudomonas piscis
Module
ppii_M00639  Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:ppii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppii03000]
    QL104_15045
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:ppii01504]
    QL104_15045
Transcription factors [BR:ppii03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    QL104_15045
Antimicrobial resistance genes [BR:ppii01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexCD-OprJ [MD:M00639]
    QL104_15045
SSDB
Motif
Pfam: HTH_IclR HTH_AsnC-type HTH_6 LacI TetR_N HTH_31 HTH_24 SpoIIID HTH_10 Xre-like-HTH HTH_17 MerR HTH_26 HTH_DeoR HTH_20 HTH_11 HTH_3 HTH_Tnp_1_2
Other DBs
NCBI-ProteinID: WMN20656
LinkDB
Position
complement(3230295..3230858)
AA seq 187 aa
MLLTSQDERLIKALAQAIVDRPRATLKELAELAGVSKATLHRFCGTRDKLLQMMEDHGQG
VLKRIIDGTDLQHDEPVAALRTLVSEHLAHREMLVFLLFQYRPDTMLNDGEDERWQFYTD
ALDAFFLRGQQLGVFRIDITAQVFTELFLTLIFGIVDAERRGRAASANSANVVEQMFLHG
AIATKPA
NT seq 564 nt   +upstreamnt  +downstreamnt
atgctcttgacctctcaagacgaacgactcatcaaggcgctggcccaggccatcgtcgac
cgtccgcgggcgaccctcaaggagctggcggaactcgccggagtgagcaaggccaccctg
caccgcttctgcggcacgcgcgacaagctgttgcagatgatggaagaccatgggcaaggc
gtgctcaaacgcatcatcgacggtaccgacctgcaacatgacgaacccgtggccgccctg
cgcacgttggtcagcgaacacctggcccaccgcgagatgctggtgttcctgttgttccaa
taccgtcccgacaccatgctcaacgatggcgaggacgagcgctggcagttctacaccgat
gccctggatgcgttcttcctgcgaggccagcaactgggggtgttccgtatcgacatcacc
gcccaggtgttcaccgagctgttcctgaccctgatcttcggcatcgtcgatgccgagcgc
cgtggccgcgcggccagcgccaactcggccaatgtggtggagcagatgttcctccacggc
gccatcgccaccaagcctgcctga

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