KEGG   Pseudomonas piscis: QL104_15470
Entry
QL104_15470       CDS       T09652                                 
Name
(GenBank) transcriptional regulator
  KO
K18294  TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
ppii  Pseudomonas piscis
Module
ppii_M00639  Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:ppii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppii03000]
    QL104_15470
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:ppii01504]
    QL104_15470
Transcription factors [BR:ppii03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    QL104_15470
Antimicrobial resistance genes [BR:ppii01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexCD-OprJ [MD:M00639]
    QL104_15470
SSDB
Motif
Pfam: TetR_N TetR_C_29 HTH_24 LacI HTH_AsnC-type MarR_2 Xre-like-HTH HTH_20 MerR HTH_10 TetR_C_43 MarR Mga HTH_3 SpoIIID HTH_26 HHH TrmB HTH_DeoR HTH_Crp_2
Other DBs
NCBI-ProteinID: WMN20738
LinkDB
Position
complement(3305573..3306133)
AA seq 186 aa
MTLHDARLLKQLTTALVNHPRATMKELAELAGVSKATLNRHYGTRASLEQQLELHAKNVL
VGITSNAGLHAAEPLEALRHLIREHLTHRDLLALLMFEHRPKGPMLEQEASYIEDLDAFF
LRGQHQGVFRIDISAAAFTELFINLIYGMVDAERRGRAASANSVHSLEQMFLHGSVAQEA
KSGRRP
NT seq 561 nt   +upstreamnt  +downstreamnt
atgacactgcatgacgcccgccttctcaaacagctgaccactgcgctagtcaatcaccca
cgtgccaccatgaaggaactggcggaactggccggagtgagcaaggccacgctcaaccgc
cactacgggacccgtgccagcctggaacagcaactcgaactgcatgccaagaacgtgctc
gtcggcatcaccagcaacgccgggctgcacgccgccgaaccgctggaggccctgcgccac
ctgatccgggagcacctcacccaccgcgacctgctggccctgctgatgttcgaacatcgt
cccaaggggccgatgctggagcaggaggcgtcctatatcgaggatctggatgcgttcttc
ctgcgcggccagcaccagggggtgtttcgtatcgatatcagcgccgcggccttcaccgag
ctattcatcaacctgatctacggcatggtcgatgctgaacgccgcggccgtgcggccagt
gccaattccgtccattccctggagcagatgttcctgcatggcagcgtcgcccaggaggcc
aagtcgggcaggcgcccatga

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