Pseudomonas piscis: QL104_23890
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Entry
QL104_23890 CDS
T09652
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii00061
Fatty acid biosynthesis
ppii00071
Fatty acid degradation
ppii01100
Metabolic pathways
ppii01212
Fatty acid metabolism
ppii02024
Quorum sensing
ppii04146
Peroxisome
Module
ppii_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
QL104_23890 (fadD1)
00071 Fatty acid degradation
QL104_23890 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
QL104_23890 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
QL104_23890 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppii01004
]
QL104_23890 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppii04147
]
QL104_23890 (fadD1)
Enzymes [BR:
ppii01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
QL104_23890 (fadD1)
Lipid biosynthesis proteins [BR:
ppii01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
QL104_23890 (fadD1)
Exosome [BR:
ppii04147
]
Exosomal proteins
Exosomal proteins of breast milk
QL104_23890 (fadD1)
Exosomal proteins of breast cancer cells
QL104_23890 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
WMN16365
LinkDB
All DBs
Position
complement(5144513..5146204)
Genome browser
AA seq
563 aa
AA seq
DB search
MIEDFWKDKYPAGIAADINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIALQLPNLLQYPIAVFGAIRAGLVVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAESVVPKTGVKHVIITEVADLLPPLKRLVINSVVKYVKKMVPAYH
LPQAIKFNDVLRKGQGQPVREANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAIMLMGNHNILITNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNSEAFRKLDFSALKVTLSGGMALQLAAAERWKSVTNCPICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTLCRVVNDAGEELPLGEVGELCVKGPQVMKGYWQ
RQDATDEVLNSEGWLKTGDIALIQPDGYIRIVDRKKDMILVSGFNVYPNELEDVLASLPG
VLQCAAIGVPDEKSGETIKIFIVAKPGVTLTKEQVMTHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtacccagctgggattgctgccgatatcaatcca
gacgagtatccgaatattcaggcggtattgaagcagtcctgccaacgtttcgctgacaaa
ccggcctttagcaacctcggcaagacaatcacctacggtgagctgtacgagctgtccggg
gcttttgccgcgtacctgcaacagcataccgatttgcagcctggcgatcgaatcgccttg
caactgcccaacctgctgcagtacccgatcgcggtattcggtgcgatccgcgccggcctg
gtggtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggggccaaggccctggtctgcctggccaacatggcccacctggcagagagcgtggtg
cccaagaccggggtcaagcacgtgatcatcaccgaggtggccgacctgctgccgccgctc
aagcgcctggtgatcaacagcgtcgtcaagtacgtgaagaagatggtgccggcctaccac
ctgccacaggccatcaagttcaatgacgtgctgcgcaaggggcagggccagccggttcgc
gaggccaacccggccagttccgacgtagcggtactgcagtacaccggtggtaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctggtggccaacatgctgcaatgcaag
gccctgatgggctcgaacctcaacgaaggttgcgaaatcctcatcacgccgctgccgctg
taccacatctatgcgttcaccttccattgcatggccatcatgctgatgggcaaccacaac
atcctgatcaccaacccgcgcgatctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggcttcgtcggcctcaacaccctgttcgtcgccctgtgcaacagcgaggcgttc
cgcaagctggacttctccgcgctgaaggtcaccctgtccggcggcatggccctgcaattg
gccgcggccgagcgctggaagtcggtgaccaactgcccgatctgcgaaggctacgggatg
accgaaaccagcccggtggccacggtcaacccgatccagaacatccagatcggcaccatc
ggcatcccggtgccgtcgaccctgtgccgcgtggtcaacgatgctggcgaggaactgccc
ctgggtgaagtcggcgagctgtgcgtgaagggcccgcaagtgatgaagggctactggcag
cgccaggacgccaccgacgaagtcctcaacagcgaaggctggctgaagaccggtgacatc
gccctgatccagcccgacggctacatccgtatcgtcgatcgcaagaaggacatgatcctg
gtctcgggtttcaacgtgtatcccaacgaactggaagatgtgctggcctcgttgccgggc
gtcctgcagtgtgcggcgatcggcgtgccggacgagaagtccggcgagaccatcaagatc
ttcatcgtcgccaagccgggggtaaccctgaccaaggagcaggtgatgacccacatgcgc
gccaacgtcaccggctacaaggtgcccaaggccgtggagttccgcgatgccctgccgacc
accaacgtcggcaagatcctgcgccgcgagctgcgtgacgaagaactgaagaagctcggc
gtgaagaagtaa
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