Pseudomonas piscis: QL104_25330
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Entry
QL104_25330 CDS
T09652
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppii03009
]
QL104_25330 (der)
Ribosome biogenesis [BR:
ppii03009
]
Prokaryotic type
GTPases
QL104_25330 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
ABC_tran
Ras
DUF5906
AAA_24
cobW
NTPase_1
AAA_18
SRPRB
NOG1
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
WMN16643
LinkDB
All DBs
Position
complement(5456557..5458029)
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AA seq
490 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILIDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKTSYVIANKV
DNIDPDMARAEFAPLGMGDAIPIAGAHGRGISQMLEITLREFPKDDADELEEGEEEIVAE
GEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFER
NEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLG
FALEAGRALVIALNKWDGMQPSERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYQS
VQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVNSRRIKLRYAHLGGANPPLIVIHGNQV
EKVPKSYVRYLENTYRRVLKLVGTPIRIEFKGSDNPYEGNKNTLTDRQVNKKRRLMSHHK
KADKKRRDKR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgacccaacgtcggcaagtccaccttgttcaac
cgcctgactcggactcgcgacgccatcgtcggcgacctgtccggtctgacccgtgatcgc
caatacggtgaggccaagtggcaagggcgtacctatattctcatcgacaccggtggtatc
tccggtgacgaacatggcatggatgaaaagatggccgagcagtcgctgctggccatcgaa
gaagccgatgtggtgctgttcctggtggacgccaaggccgggttcaccgcggccgaccag
atgatcggtgagcacctgcgcaaacgtaacaagacctcctacgtgatcgccaacaaggtc
gacaacatcgacccggacatggctcgcgccgagtttgccccgctgggcatgggggacgcg
atcccgatcgccggcgcccacggccgtggcatcagccagatgctggaaatcaccctgcgc
gaattccccaaggatgacgccgacgagctcgaagagggcgaggaagagatcgttgccgaa
ggcgaggaagccaagcgtattcctggtccgagcgagaaggatgggatcaagatcgccatc
atcggtcgtcccaacgtaggcaagtcgaccctggtcaaccgcatgctcggtgaagaccgg
gtcatcgtctacgaccagcccggcaccacccgcgacagtatctacatcccgttcgagcgc
aacgaggagaagtacacgctgatcgacaccgcgggtgtgcgcaagcgcggcaagatccac
gaggaagtcgagaagttctcggtggtcaagacgctgcaggcgatcaaggacgccaacgtg
gtgatcttcgtcatggacgcccgcgaaggtgtggtggaccacgacctgaacctgctgggc
ttcgccctggaagccggtcgggcattggtgatcgccctgaacaagtgggacggcatgcag
cctagcgagcgcgactacgtgaagaccgagctggagcgccggctgttcttcgtcgacttc
gccgatatccacttcatctcggcattgcacggcactggcgtgggcaacctgtaccaatcg
gtgcagaactccttcaagtcggcggtgacccgctggcctaccagccgcctgacccagatc
ctggaagacgccgtgagcgagcatgccccgcccatggtcaacagccgccggatcaaactg
cgctacgcccacctgggtggtgccaacccgccgttgatcgtgatccacggcaaccaggtg
gagaaagtgcccaagtcctatgtgcgctacctggagaacacctaccggcgcgtgctgaag
ctggtgggtacgccgattcgtatcgagttcaagggcagcgacaacccgtacgagggcaac
aagaacacgctcaccgaccgtcaggtcaacaagaagcgccgcttgatgtcgcaccacaag
aaagccgacaagaagcgccgcgacaagcgttga
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