Pseudomonas piscis: QL104_29605
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Entry
QL104_29605 CDS
T09652
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppii
Pseudomonas piscis
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppii03021
]
QL104_29605 (rpoH)
Transcription machinery [BR:
ppii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QL104_29605 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
WMN17453
LinkDB
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Position
complement(6339271..6340125)
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGQD
MAFDPAAEADDDSAFQSPANYLEDHRYDPALQLEDADWSDNSTSNLHEALQVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttacgcattggttccaggcgcaaacctggaggcctat
gtgcacacggtgaacagcattccattgctgacgccggagcaggagcgtgaactggccgag
agtctctactatgagcaggatcttgaggcagctcggcagatggtgcttgcccacctgcgt
tttgtcgtacatatcgcccgcagctattccgggtacgggctggcccaggccgacctgatc
caggaaggcaacgttggcctgatgaaagccgtgaagcgcttcaatcccgagatgggcgtg
cgcctggtgtcctttgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcggatcgtcaaggtcgcgaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaagaaacgcctggcctggctgaacaacgaggaagtccatcgcgtggcggaa
agccttggcgtggagccgcgtgaagtgcgggagatggaaagccgcctgaccggtcaggac
atggccttcgacccggctgccgaagccgatgacgacagcgctttccagtcgccggccaac
tatctggaagatcaccgctacgatccggcgttgcagctggaagacgctgactggagcgac
aactccaccagcaacctgcatgaagcgttacaagtgctggacgagcgtagccgcgacatt
ctctatcagcgctggctggctgaagagaaggcaacgctgcatgacctggcgcagaagtac
aacgtttccgccgagcggatccgccagctggaaaagagcgcaatgaacaagctgaagctg
tccattgccgcctaa
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