Pseudomonas piscis: QL104_30430
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Entry
QL104_30430 CDS
T09652
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii00300
Lysine biosynthesis
ppii00470
D-Amino acid metabolism
ppii01100
Metabolic pathways
ppii01110
Biosynthesis of secondary metabolites
ppii01120
Microbial metabolism in diverse environments
ppii01230
Biosynthesis of amino acids
Module
ppii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QL104_30430 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QL104_30430 (lysA)
Enzymes [BR:
ppii01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QL104_30430 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WMN17612
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Position
6512521..6513768
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AA seq
415 aa
AA seq
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MDAFNYRDGELLAEGVALSAIAERFGTPTYVYSRAHIEAQYQAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGQADKVVFSGVGKTRDDMRRALEVGVH
CFNVESAEELERLQQVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED
VYIRAAQLPNLEIVGVDCHIGSQLTTLAPFIDALDRLLDLVDRLAECGIYLRHIDLGGGL
GVRYRDEEPPLAADYVKAVRERLAGRDLALVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDGAMNDLIRPALYQAWMDVSAVRPRDAEPRTYDIVGPICETGDFLAKERSLALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAVQVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcaactaccgcgacggcgagctgctcgcggaaggcgtagccctgtccgcc
atcgccgagcgtttcggtacgcccacctacgtctattcccgggcgcatatcgaagcccag
taccaggcctatgccgacgctcttgccggcatgccgcacctggtctgcttcgcggtgaaa
gccaactccaacctgggtgtgctcaatgtcctggcgcgcctgggcgccggcttcgacatc
gtctccggtggcgaactggaacgagtgctggctgccggcggccaggccgacaaggtcgtc
ttttccggcgtcggcaagacccgtgatgacatgcgccgcgccctggaagtgggcgtccac
tgcttcaacgtcgaatccgccgaggaactggagcgcctgcaacaggtggccgccgagctg
ggcgtgcgcgccccggtgtcgctgcgggtcaaccccgatgtcgatgccggcacccatccg
tacatttccaccggcctcaaggaaaacaagttcggcatcgccatcgccgccgccgaggat
gtgtacatccgcgcggcacagctgcccaacctggagatcgtcggggtcgactgccacatc
ggttcgcaactgaccaccctggcgcccttcatcgatgccctggaccgcctgctggacctg
gtggatcgcctcgccgaatgcggtatctacctgcgccacatcgacctcggtggcggcctg
ggcgtgcgttatcgcgacgaagagccgccgttggccgccgactacgtcaaggcggtacgc
gagcgcctggccggtcgcgacctggccctggtgttcgagccgggccgcttcatcgtcgcc
aacgccggcgtgctgctgacccgcgtggagtacctcaagcacaccgaacacaaggacttc
gccatcgtcgacggcgccatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gatgtcagcgccgtccggccccgggatgccgaaccccgtacctacgacatcgtcggcccg
atctgcgaaaccggcgatttcctcgccaaggaacgctcgctggccctggccgaaggtgac
ctgctggccgtgcattccgccggcgcctatggtttcgtcatgagctctaactacaacacc
cgcggccgtgccgccgaagtactggtcgatggcgaccaggctgtgcaagtgcgtcgccgc
gaaacggtggccgagttattcgctggcgaaagcctgctgccggagtaa
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