Pseudomonas piscis: QL104_30435
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Entry
QL104_30435 CDS
T09652
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii00300
Lysine biosynthesis
ppii00470
D-Amino acid metabolism
ppii01100
Metabolic pathways
ppii01110
Biosynthesis of secondary metabolites
ppii01120
Microbial metabolism in diverse environments
ppii01230
Biosynthesis of amino acids
Module
ppii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QL104_30435 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QL104_30435 (dapF)
Enzymes [BR:
ppii01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QL104_30435 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WMN17613
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Position
6513773..6514603
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRNTGIGFDQLLIVEAPTNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRRIRVETKSGVIELDVRNDGQISVDM
GPPRLVPADIPFQAPAQATSYALEVDGRQVELAAVSMGNPHAVLRVDDINSAPVHELGPK
IEHHPRFPARVNVGFLQVLDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcacatccaacccaagcacgccaagcaatggggggatcgcaatacc
gggatcggtttcgaccagttgttgatcgtcgaggccccgaccaacccggatgtggatttc
cgctatcggatcttcaattccgatggttccgaggtggagcaatgcggcaacggtgcgcgc
tgcttcgcccggttcgtactggacaagcgcctgaccaccaagcgccggatccgcgtggag
accaagagcggcgtgatcgagctcgacgtgcgcaacgacggccagatcagcgtcgacatg
ggcccgccacgcctggtgccggcagatatcccgttccaggcgccagcccaggccaccagc
tatgccctggaggtcgacggacgccaggtcgagctggccgccgtctccatgggcaacccc
catgcggtgctgcgggtcgatgacatcaacagcgcaccggtccacgagctgggcccgaag
atcgagcaccacccgcgcttcccggcccgggtcaatgtcggttttctccaggtcctggat
cgccagcgcgcgcaattgcgggtgtgggaacgtggcgccggggaaacccaggcctgcggg
accggcgcctgcgcagccgcagtggccgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgccgggcggacgcctgtccatcgaatgggcaggccctggccaaccggtg
ctgatgaccggcccggcagtacgcgtatacgaaggacaggtgcgtctatga
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