KEGG   Pseudomonas piscis: QL104_30435
Entry
QL104_30435       CDS       T09652                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ppii  Pseudomonas piscis
Pathway
ppii00300  Lysine biosynthesis
ppii00470  D-Amino acid metabolism
ppii01100  Metabolic pathways
ppii01110  Biosynthesis of secondary metabolites
ppii01120  Microbial metabolism in diverse environments
ppii01230  Biosynthesis of amino acids
Module
ppii_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppii00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    QL104_30435 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    QL104_30435 (dapF)
Enzymes [BR:ppii01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     QL104_30435 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: WMN17613
LinkDB
Position
6513773..6514603
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRNTGIGFDQLLIVEAPTNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRRIRVETKSGVIELDVRNDGQISVDM
GPPRLVPADIPFQAPAQATSYALEVDGRQVELAAVSMGNPHAVLRVDDINSAPVHELGPK
IEHHPRFPARVNVGFLQVLDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcacatccaacccaagcacgccaagcaatggggggatcgcaatacc
gggatcggtttcgaccagttgttgatcgtcgaggccccgaccaacccggatgtggatttc
cgctatcggatcttcaattccgatggttccgaggtggagcaatgcggcaacggtgcgcgc
tgcttcgcccggttcgtactggacaagcgcctgaccaccaagcgccggatccgcgtggag
accaagagcggcgtgatcgagctcgacgtgcgcaacgacggccagatcagcgtcgacatg
ggcccgccacgcctggtgccggcagatatcccgttccaggcgccagcccaggccaccagc
tatgccctggaggtcgacggacgccaggtcgagctggccgccgtctccatgggcaacccc
catgcggtgctgcgggtcgatgacatcaacagcgcaccggtccacgagctgggcccgaag
atcgagcaccacccgcgcttcccggcccgggtcaatgtcggttttctccaggtcctggat
cgccagcgcgcgcaattgcgggtgtgggaacgtggcgccggggaaacccaggcctgcggg
accggcgcctgcgcagccgcagtggccgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgccgggcggacgcctgtccatcgaatgggcaggccctggccaaccggtg
ctgatgaccggcccggcagtacgcgtatacgaaggacaggtgcgtctatga

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