Pseudomonas piscis: QL104_30770
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Entry
QL104_30770 CDS
T09652
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ppii
Pseudomonas piscis
Pathway
ppii02025
Biofilm formation - Pseudomonas aeruginosa
ppii03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QL104_30770 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QL104_30770 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppii02044
]
QL104_30770 (tssM)
Secretion system [BR:
ppii02044
]
Type VI secretion system
Imp/Vas secretion system core components
QL104_30770 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
DUF3209
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
WMN17678
UniProt:
A0A7X1PGS4
LinkDB
All DBs
Position
complement(6583443..6586946)
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AA seq
1167 aa
AA seq
DB search
MKAFFSFVIRWVIPLLGLIALSLIIWFIGPLLEFLVPEGRRWALIIFIFAVWIAYRVFRI
IQARRHAAKVLQSLAADTPPDPDSLATAEELAALRQRMDEALVLLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSHANVDKAAWLGFLDLLKTQRSRRPIDGAFVAISLSDLLLGSEAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDSLSKEERAQVWGMTFALDDGKGSDSP
LAHLPAELAALEQRLNERLVERLQQERDPARRDLIYGFPQQFAALKESLQGFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQTGTGRSYFIEKLFSAV
AFAERGLVGVNPKVERRRKWIARGALAASVALVLVVGTLWIVSYRANQSYIAQVDQRVAP
VRQGVQNLSPAQRDVLAVLPLLNATRNLAGDAPGWAEGLGLYQGDMLEAESASVYRKLLV
AVFAPRLMTRIEEQLHSGGNSDFLYEGLKAYLMLADNEHYDADFIKAWITLDWDQTLSRE
LPPDQRQALTGHLQALFEKHPPNARLDQRLIDDLRRQLQQLPVAQRVYDRVKRAKLPAGV
PDFRLSEAGGRDAALVFTRKSGKPLSEPLSGLFTAKGYREGFLLASVNQAGTLAEEQWVL
GRDQAEQQNVASLAADVRRLYFQDYLRQWDALLADIDFVPITSVAQAADVLRIISGPTSP
LKKLLVAVSRETDLQQEERLLAAQGQKVEGGVDQLKQRLGSLLGQEQAAGPAAVASEDPV
SLHFADLISLVSKGEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQASAAAAR
VSLTAARQPPVVQGLVKSVVGSTTNTMMGGVRNQLNAAWVSEVVNVYRQSLSGRYPMSPG
SSRDATLEDFGQFFGAGGVMDSYFRKYLQPYVNTSTATWSWQPGAAQKLGISPGVLQTFQ
RASNIRDAFFRSSGGTQPAVRFELKPVEMDANISQFLLDLDGQQLSYDHGPSRPVAMQWP
NPGSIGVVRLSIMPPSASGRSGITLDGPWAWFRLLEQSDLSATNSPDRFNLRLRVDGASI
SYELRASSAFNPFKSRVLSGFSLPERL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttgtgattcgctgggtgatcccgctgctggggctgatcgcc
ctgagcctgattatctggttcatcggcccgctgctggagttcctggtgccggaaggccgg
cgctgggcgctgatcatcttcatcttcgcggtgtggatcgcctaccgggtgtttcgcatc
atccaggcccgccggcatgcggccaaggtcttgcagagcctggcggccgatacgccaccg
gacccggacagcctggccaccgccgaggagctggcggccctgcgccagcgcatggacgag
gccctggtgctgctgaagaaggccaagctcggcggtgacgagaggcgcaacctctacgaa
ctgccgtggtacgtgatcatcggtccgcccggctcgggcaagaccaccgcgctggtcaac
tccggcctgcatttccccctggcggcacaattgggtgccggcgccgtgcgtggtgtcggc
gggacgcgcaattgcgactggtggttcaccgaccaggccgtgctgctggacaccgccggc
cgctacaccacccaggacagccatgcgaatgtggacaaggcggcctggctgggctttctc
gacctgctcaagacccagcgctcgcggcggccgatcgatggcgccttcgtggccatcagc
ctgtccgacctgctgctgggcagtgaagccgagcgagcggcccatgcggcggcgatccgc
ctgcggatccaggagctgtacacccagctgggcgtgcgcttcccgatctacctgatgctg
accaagctcgacctggtgccgggcttcatggagttcttcgactccctgagcaaggaagag
cgagcccaggtctggggcatgaccttcgccctggatgacggcaagggcagcgacagcccc
ctggcgcacctgccggcggagttggcggccctggagcagcgtctcaacgagcgcctggtg
gagcgcctgcaacaggagcgcgacccggcgcggcgcgacctgatctacggcttcccgcag
cagttcgccgcgctcaaggagtccttgcagggcttcctcgaaggcgtgttcaagcccaat
gccttcgaagagcgggtgctgctgcgcggggtgtacttcaccagcggcacccaggaaggc
agccccatcgaccgcctgatcggcgccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagaccggcaccggccgcagctacttcatcgagaagctgttcagtgccgtg
gctttcgccgagcgcgggctggtgggggtcaaccccaaggtcgagcgtcggcgcaaatgg
atcgcccgtggcgccctggccgccagcgtggccctggtgctggtggtcggcaccctgtgg
atcgtcagctaccgggccaaccagagctatatcgcccaggtcgaccagcgcgtggcgccg
gtgcgccagggcgtgcagaacctcagcccggcccagcgcgatgtgctggcggtgctgccg
ctgctcaacgcgacccgcaacctggccggcgatgccccgggctgggccgagggtcttggc
ctgtaccagggcgatatgctcgaggccgagtccgccagcgtctatcgcaagctgctggtg
gcggtgttcgccccacggttgatgacccgcatcgaagaacaactgcacagcggcggcaac
tcggacttcctctacgaggggctcaaggcctacctgatgctggctgacaacgagcattac
gatgccgacttcatcaaggcctggatcaccctggactgggaccagaccctgtcccgcgag
ctgccgcccgaccagcgccaggccctgaccgggcacttgcaggcgttgttcgagaagcat
ccgcccaatgcccgcctggaccagcgcctgatcgacgacctgcgccgccagttgcagcag
ttgccggtggcccagcgggtctacgaccgggtcaagcgcgccaagcttccggccggcgtg
ccggactttcgcctgagcgaagccggtggccgcgatgcggcgctggtgttcacgcgcaag
agcggcaagccattgagcgaacccctgagcgggctgttcaccgccaagggttatcgcgag
ggcttcctgctggccagcgtcaaccaggccggcaccctggccgaggagcagtgggtgctg
ggccgcgaccaggccgagcaacagaacgtcgccagcctggccgccgatgtgcgccgcttg
tatttccaggactacctgcgccagtgggacgcgctgctggccgacatcgacttcgtgccg
atcaccagcgtggcccaggccgccgacgtgctgcggatcatctccggtcccacctcgccg
ttgaaaaaactgctggtggcggtatccagggaaaccgacctgcaacaggaagaacgcctg
ctggcggcccagggccagaaggtcgagggcggggtcgaccagctcaagcagcgcctgggt
tcgctcctgggccaggagcaggcagcgggtccggcggccgtggccagcgaagacccggtg
agcctgcacttcgccgacctgatcagcctggtgagcaagggcgagggtgagccggcggcc
atcgatggcctgctggcggacatgaacgccctgtacgtgcaggtcagcgccatggtcggc
gccagcggcgatgcgctgctgggcgaagccaagaaccaggccagcgccgctgcggcccgg
gtcagcttgaccgccgcgcgccagccgccagtggtccagggattggtcaagtcggtggtc
ggttccaccaccaacaccatgatgggcggggtgcgcaaccagttgaacgcggcctgggtc
agcgaggtggtgaatgtctaccgccaatccctgagcgggcgctacccgatgtcgccgggc
agttcgcgggatgcgaccctggaggacttcggccagttcttcggtgcgggcggggtgatg
gacagctacttccgcaagtacctgcagccctacgtcaacacctccactgctacctggagc
tggcagccgggagcggcgcagaaactggggatttcccccggggtgttgcagacgttccag
cgtgcttcgaacatccgcgatgcgttcttccgctccagcggcggcacccagccggccgtg
cgcttcgagctcaagccggtggagatggacgccaatatcagccagttcctgctcgacctg
gatggccagcaactgagctacgaccacggcccgagccggccggtggccatgcagtggccg
aacccgggaagcatcggcgtggtgcgcctgtcgatcatgccgccgtcggccagcgggcgt
tcggggatcaccctggacggcccttgggcctggttccgcctgctggagcaatcggacctt
tccgccaccaactcgccggaccgcttcaacctgcggttgcgggtcgatggcgcgagcatt
tcctatgagctgcgtgccagcagcgccttcaaccccttcaagagccgggtgctcagcggc
ttcagcctgccggagcggctatga
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