Pseudomonas piscis: QL104_30830
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Entry
QL104_30830 CDS
T09652
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
ppii
Pseudomonas piscis
Pathway
ppii02025
Biofilm formation - Pseudomonas aeruginosa
ppii03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QL104_30830 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QL104_30830 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppii02044
]
QL104_30830 (tssH)
Secretion system [BR:
ppii02044
]
Type VI secretion system
Imp/Vas secretion system core components
QL104_30830 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Sigma54_activat
Zeta_toxin
nSTAND3
TniB
AAA_7
AAA_25
ATPase_2
NACHT
AAA_14
Torsin
AAA_18
CbiA
Hpr_kinase_C
Clp_N
SRP54
Cyclin_N
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
WMN17690
LinkDB
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Position
6599317..6601992
Genome browser
AA seq
891 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NLEPARLAKDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVIG
ILKTPSLRHALLGLSKEFDKIKVETLAERFDEYIGDSPENALAASDGFNAGAVPGEASGA
MAPSALGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEQHHQVQILDEALEAAVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREQAIGVAIGQRQVNSENL
LAAERERLAELESRWSEEKTLVDELLATRAQLRENVGLVDSDAGDEGHGLREKLVDLQQR
LSALQGENPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDQHLKKRIIGQDHA
LQMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSE
FQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEMFFQVFDK
GVMEDGEGRMIDFKNTLILLTTNAGTELIADVCKNPQAVPEPEEIAKALRQPLLEIFPPA
LLGRLVTIPYYPLSDEMLKAITRLQLGRIKKRVESTHKVGFDFDDAVVDLIVSRCTETES
GGRMIDAILTNSLLPDMSREFLTRMLEGKALAGVRISQRDNELHYDFSEPN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgcggcgctgttcggcaaactcaacagcgttgcctacaaagcc
atcgaagccgccacggtcttctgcaagttgcggggcaacccctatgtggagctggcccac
tggttccaccagttgctgcagctgcaggactcggacctgcaccgcatcatccgccagttc
aacctggagccggcgcgcctggccaaggacctgaccgaggccctggaccgcctgccccgg
ggctcgacctcgatcaccgacctgtcgtcccacgtcgaggaagcggtggagcgcggttgg
gtctacggcagcctgatgttcggcgaaagccaggtacgcaccggctacctggtgatcggc
atcctcaagaccccaagcctgcgccatgcgttgctggggctgtccaaggagttcgacaag
atcaaggtcgagaccctggccgaacgcttcgacgaatacatcggcgactcgccggaaaac
gccctggccgccagcgacggcttcaatgccggcgcagtgcccggcgaagccagcggcgcc
atggcccccagcgccctgggcaagcaggaagctctcaagcgcttcaccgtggacctgacc
gaacaggcccgcagcggcaagctcgaccccatcgtcggccgtgacgaagagatccgccag
ctggtggacatcctcatgcgccgccggcagaacaacccgatcctcaccggcgaggccggg
gtgggcaagaccgccgtggtcgaaggtttcgccctgcgcatcgtcgccggcgacgtacca
ccggcgctcaaggacgtcgaactgcgcagcctcgatgtcggtctgctgcaggccggcgcc
agcatgaagggcgaattcgaacagcgcctgcgccaggtcatcgaggacgtccaggcttcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtcggtgccggtggcgcc
gccggcaccggcgacgcggccaacctgctcaagccggccctggcccgcggcaccctgcgc
accgtggccgccaccacctgggccgagtacaagaagcacatcgagaaggacccggccctg
acccggcgcttccaggtggtgcaagtggccgaaccgtcggaagacaaggccctgttgatg
atgcgcggcgtggcctcgaccatggaacagcaccaccaggtgcagatcctcgacgaagcc
ctggaggcggcggtcaagctgtcccatcgctacatcccggcgcgccagttgccggacaag
tcggtgagcctgctggacaccgcctgcgcccgggtcgccatcagcctgcatgcggtgccg
gccgaagtggacgacagccgccggcgcatcgaggccctggaaaccgagctgcagatcatc
gcccgggaacaggcgatcggcgtcgccatcggccagcgccaggtcaacagcgagaacctg
ctggccgccgagcgtgagcgcctggccgagctggaaagccgctggagcgaagaaaagacc
ctggtggacgagttgctggccacccgtgcccaactgcgcgagaacgtcggcctggtggac
agcgatgcgggcgatgaaggccatggcctgcgcgagaagctggtggacctgcaacaacgc
ctcagcgccctgcagggcgagaacccgctgatcctgccgaccgtggactaccaggcggtg
gcctcggtggtggccgactggaccgggattccggtgggtcgcatggcccgcaacgaaatc
gagaccgtgctcaacctcgaccagcacctgaagaagcgcatcatcggccaggaccacgcc
ctgcagatgatcgccaagcgcatccagacttcccgcgcaggcctggacaaccccaacaag
ccgatcggcgtgttcatgctcgccggcacctccggggtgggcaagaccgagaccgccctg
gccctggccgaagccatgtacggcggcgagcagaacgtcatcaccatcaacatgagcgag
ttccaggaagcccacaccgtgtccaccctcaagggggccccgcccggctacgtcggctac
ggcgaaggcggcgtgctgaccgaagcggtgcggcgcaagccctacagcgtggtgctgctg
gatgaagtggaaaaagcccacccggacgtgcacgagatgttcttccaggtgttcgacaag
ggcgtcatggaagacggcgaaggccgcatgatcgacttcaagaacaccctgatcctgctc
accaccaacgcgggtaccgagctgatcgccgatgtctgcaagaacccgcaggccgtgccg
gagccggaagagatcgccaaggccctgcgccagccgctgctggagatcttcccgccggcg
ctgctgggccgcctggtgaccatcccctattacccgctgagcgacgagatgctcaaggcc
atcacccgcctgcaactgggacggatcaagaagcgcgtggagagcacccacaaggtgggc
ttcgacttcgacgacgcggtggtcgacctgattgtctcgcgctgcaccgagaccgaaagc
ggtggccgcatgatcgacgccatcctgaccaacagcctgctgccggacatgagccgcgag
ttcctcacgcgcatgctcgaaggcaaggccctggccggagtgcgcatcagccagcgggac
aacgaactgcactacgacttcagcgagccaaactaa
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