Pseudomonas piscis: QL104_30845
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Entry
QL104_30845 CDS
T09652
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
ppii
Pseudomonas piscis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
AHH
PAAR_motif
RHS
Motif
Other DBs
NCBI-ProteinID:
WMN17693
LinkDB
All DBs
Position
6604453..6608892
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AA seq
1479 aa
AA seq
DB search
MSDALWAARLGDGLEHTSMMADILGGVLEAAATIAIGTLATMAVAAAVGVSLATGGLGAC
VLGLVVSVVVGVAMSKTGADKGLSSLCEDIGNALFPPSIQANIASGSDDTKINNIPAARA
AGIAPPTRISGDGAEEGESTDSPSATPEEEPGFIDMAKEFFSQMWRPTVATPAPGSEPRD
QDLITCTKHPPMPPQYLAEGSEKVSINGQPAVRSGDRSTCDAKVVSAGPISPDVTIGGGS
VVVREIRSGKTPGIGLALTVLMMLKGGKGKFWSNLPCMLMSGVNSFVVSQATSALTQAIV
SSTNPVHAATGAKVLGDDDDLDFALPGVLPIDWQRVYNSRDERRDGLFGAGWSVRYEVCV
ELQAHPLGGERLVYTDEQGRRIDMGSIPLGSAVFSDGEGLSVRRNPDGRLLIESEDGLYR
LFEPSPANPQRLRLNQLGDRNHNRIYLDYDTSGRLERLRDTFDQVQAELVYSNQWPARVA
RIERLYPDRQRQLLASYAYDDRGDLAQVQDISQQVQRRFAYDSGRRMIEHRLPTGLRCFY
EWACIDEREWRVVRHSTDAGEEFRYEYDLQAGLTRVTDNLQRQSLRRWNRQQQITEYQDN
LGQAWHFQWNEERQLLGATDPQGGQYQYQYDEAGNLCRSVDPLGRTESTLWLEHWALPLA
QTDAAGNTWTYQYDERGNCIRETDPLGHSTRYHHDGRGQVLEIIDASGKSKTLAWNDQGQ
LLRHVDCSGYPTSFSYDRQGYLQVITNALGERQVFEHDVQGNLLQSQLPDGRSERYQYDA
SGLLTQYTDPAGQSTAYQYDHRGQLQLRIDPLRRQVRLEYDVFGRLLALTNENGESYRFT
WDAGDRLVQQQDLDGSARRFVYDRLDQVARLEFVPAPPSAESTAIDPIVHELQRDAIGRL
VGKITSDGQTLYGYDVLDQLTEVTFTDKAGQQQKLAFAYDAIGQLLAEHNPSGNLHYQYD
ELGNLTRTQLPDGRWLNRLYYGSGHLHQINLDGQVISDFERDRLHREVLRTQGRISTRSE
YDRGGRLRARLQHPTQAQGNPALELHKHFEFDPGDNLIGRMKRQPHGQDRQLLHYDASGL
IIASQNRANGQDETFGYDAAANLLDPSRPSGGLVRHNKLLTYQDKRYRYDGFGRMIEKRS
TSRGLQLFTYDAEHRLVEVRNQGAAGQTLVRMSYDPFGRRVAKSLYDSQGQLLEQTHFTW
DGMQLLQERSSRLDSLYIYAPDSDEPLARVDGQGAAQKVRYYHNDFSGLPEQLTEVDGHN
VWKASYRIWGNTWEEAREPYYIEEQNLRFQGQYLDREIGLHYNTFRFYDPDVGRFTTPDP
IGLDGGLNLYLYAPNPFGWIDPLGWSCTASINRKIKALKKQGFQDHHILSDKHPSTKNHP
LLKLAGYDLQSRQNKIFLPNNKAALTYKKRSIHQGRHASRVSENLATKMTQAQKLGKKNK
WTQEQYRKALDKIVADERKLLRSGDRQLNKNARPGAYYD
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcactctgggccgcccgcctgggcgacgggctggaacacacctcgatgatg
gccgacatcctcggcggcgtactggaggcagccgctaccatcgccatcggtactctggcc
accatggccgtggccgcggcggtaggcgtcagcctggccaccggcggcctcggcgcctgc
gtcctggggctggtggtcagcgtggtggtcggcgtggccatgagcaagaccggcgccgat
aagggcctgagcagtttatgcgaggacataggtaacgcgctgttcccgccctcgatccag
gccaacatcgccagcggctccgacgacaccaagatcaacaacatccccgcggcccgggcc
gccgggatcgcgccaccgacccggatcagcggtgacggcgccgaggaaggcgaaagcacc
gacagcccatcggcgaccccggaggaagaaccaggcttcatcgacatggccaaggagttt
ttctcgcagatgtggcggcccaccgtggccacccctgctcccggctccgagcccagggac
caggacctgatcacctgcaccaagcacccgcccatgccaccgcagtacctggccgaaggc
tcggagaaggtcagcatcaacggccagccggcggtacgcagtggcgatcgcagcacctgt
gacgccaaggtggtatcggccggccccatctcccccgacgtgaccatcggtggcggctcg
gtggtggtgcgcgagatccgcagcggcaagactccgggcatcggcctggcgctgaccgtg
ctgatgatgctcaagggcggcaagggcaagttctggagcaacctgccgtgcatgctgatg
tcgggggtcaactccttcgtggtcagccaggccaccagcgccctgacccaggctatcgtc
agctcgaccaatccggtgcatgcggccaccggggccaaggtactgggcgatgacgacgac
ctggacttcgcgctgcccggcgtcctgcccatcgactggcagcgtgtctacaacagccgt
gacgagcgtcgtgacggcttgttcggcgcgggctggagcgtgcgctacgaagtctgcgtc
gagctgcaagcacatcccctgggcggcgagcgactggtctacaccgatgagcagggacgg
cgcatcgacatgggctcgattcccctgggctcggcggtgttcagtgatggcgaagggctc
agcgtacggcgcaatcccgatgggcgcctgctgatcgaaagcgaagatgggctgtaccgc
ctgttcgagcccagtccggccaacccacagcggctgcgcttgaaccagctgggcgatcgc
aaccacaaccgtatttacctggactacgacaccagcgggcgccttgagcgcctgcgcgac
accttcgaccaggtccaggccgagctggtctacagcaatcagtggccggcccgggtggca
cgcatcgagcgcctttatcccgaccggcagcgccagttgctggccagctatgcctatgac
gatcgcggtgacctggcgcaagttcaggacatcagccagcaggtgcagcgacgcttcgcc
tatgacagcggtcggcgcatgatcgagcaccgactgcctaccggcctgcgctgcttctac
gagtgggcctgcatcgacgagcgcgaatggcgggtggtgcgccactccaccgacgctggc
gaggagtttcgctacgaatacgacttgcaggcagggctcacgcgggtgaccgacaacctg
cagcgccagagcctgcgccgctggaaccgacaacagcagatcaccgagtaccaggacaac
ctgggacaggcctggcatttccagtggaacgaggaacgccagttgcttggcgccaccgac
ccgcagggcgggcagtaccagtaccagtacgacgaggccggcaacctctgccgcagtgtc
gaccccctggggcggaccgagtcgaccctctggctggagcactgggcattgccgctggcg
cagaccgacgccgcgggcaatacctggacctatcaatacgatgagcgtggcaactgcatt
cgtgaaaccgacccgttgggacacagcacccgctatcaccatgacgggcgcggccaggtc
ctggaaatcatcgatgccagcggcaagagcaagaccctggcctggaacgaccagggccag
ttgctcaggcatgtggactgctccggctacccgaccagcttcagctatgaccgtcagggc
tatctgcaagtcatcaccaacgcgctcggcgagcgccaagtcttcgagcacgatgtccag
ggcaacctgctgcagagccagttgcctgacggacgcagcgaacgctaccagtacgacgcc
agcggcctgctgacccaatacaccgacccggcaggccagagcaccgcctaccagtacgac
caccggggccagctacaactgcgtatcgacccactgaggcggcaggtacgcttggagtac
gatgtctttggccgcctgctggcactgaccaatgaaaacggcgaaagctaccgcttcacc
tgggatgccggtgaccgcctggtgcaacagcaggatctggacggcagcgcccgccgcttc
gtctacgaccgcctggaccaggttgcccggctggaattcgttcccgcacccccaagcgca
gaatccacggcgatagaccccatcgtgcatgagctacagcgtgacgcgattggccgcctg
gtcggcaagatcaccagcgacggccaaacgctctatggctacgacgtcctggaccagctg
accgaggtgacattcaccgacaaggccggccagcaacagaaactggcgttcgcctacgat
gccatcggccaattgctcgcagaacacaaccccagcggtaacctgcattaccaatacgac
gagctgggcaacctcactcgcacccaactaccggatggccgctggctcaatcgcctgtat
tacggcagtggtcacttgcaccagatcaacctcgacggccaggtcatcagcgacttcgag
cgcgaccgtctgcatcgcgaggtgctgcgcacccagggccgaatcagcacgcgcagcgaa
tatgatcgcgggggtcgcctgcgcgcacgcctgcaacacccgacccaggctcagggcaat
ccagcgctggagttgcacaagcatttcgagttcgaccctggcgacaacctgatcgggcgg
atgaagcgccagccccacgggcaagacaggcaattgctgcactacgatgccagcggcctg
atcatcgccagccagaaccgcgccaacggtcaggacgaaaccttcggctacgacgcggcg
gccaatttgctcgatccgtcgcggccatccggcgggctggtgcgtcacaacaagctgctg
acctaccaggacaaacgctatcgctacgacggtttcggccggatgatcgaaaaacgcagc
accagccggggcctgcagctcttcacctacgatgccgagcatcgcctggtggaagtgcgc
aaccagggcgccgcaggccagacactggtgcgcatgagctacgacccgttcggccggcgc
gttgccaagagcctctacgacagccagggccagctcctggagcagacccacttcacctgg
gatggcatgcagctgttgcaggagcgcagcagccgcctggacagcctctacatctacgcc
cccgacagtgacgagcccctggcccgggtcgatggccaaggtgccgcgcagaaagtccgg
tattaccataacgacttcagcgggttgcccgagcagttgaccgaggtcgacggccataac
gtctggaaggccagctaccggatctggggcaacacctgggaagaagcacgtgagccctac
tacatcgaagagcagaacctgcgcttccagggacaatacctggaccgtgagatcggcctg
cactacaacaccttccgcttctatgacccggacgtagggcgctttaccacaccggacccg
attggcctggatggtggcctgaacctctacctctatgctcccaatcccttcggctggatc
gacccgctgggctggagctgcaccgcgtcgatcaacaggaagatcaaggcgctcaagaag
caaggcttccaggaccaccatatcctcagcgacaagcaccccagcacgaagaaccatcca
ttgcttaagctggctggctacgatctgcagagccggcagaataagatcttcctgccgaac
aacaaggccgccttgacctacaagaaaaggtcgatccaccagggccgccatgcaagccga
gtcagcgaaaacctggcgacgaaaatgacccaggcacaaaaactcggcaagaagaacaaa
tggacccaggagcagtaccgcaaggccctggacaagatcgtcgccgatgagcgcaagttg
ttgcgctcgggcgatcgacaactgaacaagaacgcccggccgggcgcctattacgactag
DBGET
integrated database retrieval system
