Pseudomonas piscis: QL104_31215
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Entry
QL104_31215 CDS
T09652
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii03420
Nucleotide excision repair
ppii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QL104_31215 (uvrD)
03430 Mismatch repair
QL104_31215 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppii03400
]
QL104_31215 (uvrD)
Enzymes [BR:
ppii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QL104_31215 (uvrD)
DNA repair and recombination proteins [BR:
ppii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QL104_31215 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QL104_31215 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
RHH_1
Motif
Other DBs
NCBI-ProteinID:
WMN17762
LinkDB
All DBs
Position
6684143..6686326
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRDLGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRGIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGESLMVVGDDDQSIYGWRGAKIENIHQYSDDFPDTEVIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRQLVANKGLTGRAASALGAFMELIENLAAKTLDMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEDLTPLAAFLGHA
SLEAGDAQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
SQSTSSLFSGSAIPETGLSLGQAVRHAVFGDGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctccctcttgttgaattctctcaacgatgcccaacgccaggccgta
gcggcctccttgggtcgtcagttggtcctggccggcgctggttccggcaaaacccgtgtg
ctggtgcaccgtatcgcctggctgatccaggtcgagaacgcctcgccccactcgatcctg
tcggtgaccttcaccaacaaggcggcggccgagatgcgccaccgtatcgagcaattgctg
ggcatcaacccggcgggcatgtgggtcggcaccttccacggcctggcccaccgcctgctg
cgtgcccactggcaggaagccgggctgagccagaccttccagatcctcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgacctgggcctggatgaacagcgctggccg
gcccgccaggcccagtggttcatcaacggccagaaggacgagggcctgcgcccgcagcat
atccaggccagcggcgacctgttcctggccaccatgcgcggcatctacgaagcctacgag
gccgcctgccagcgcgcgggggtcatcgacttctccgaactgctgctgcgcgccctggac
ctgtggcgcgaccacccgggcctgctggcgcactaccagaagcgcttccgccatgtgctg
gtggacgaattccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggcccag
ggcggcgagagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgtggc
gcgaagatcgagaacatccaccagtactccgacgacttcccggacaccgaggtgatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggccgccaacgccctgatcgcc
aacaacaccgggcgcctgggcaaggaattgtggaccgatggcggcgatggcgaggccatc
aacctgtacgccgccttcaacgaacacgatgaagcccgctacgtggtggaaaccatcgag
agcgcgctcaagaccggcctggcccgcagcgacatcgccattctctaccgctccaacgcc
cagtcccgggtgctggaggaagccctgctgcgcgaacgcatcccgtaccgcatctatggc
ggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcttgctg
gaaggccggggcaacgacgccgccctggagcgggtgatcaacgtcccggcccggggcatc
ggcgagaagaccgtcgaggcgatccgcgagcatgcccgccacagcgatgtatcgatgtgg
gaagccatgcgccaactggtggccaacaaaggcctgaccggtcgcgccgccagcgccctg
ggggccttcatggagctgatcgagaacctggcggccaagaccctggacatgccgctgcac
ctgatgacccagacggtgatcgagcagtcggggctgattgcctaccacgaagcggaaaag
ggcgagaaaggccaggcccgggtagaaaacctcgaggaactggtcagcgccgcgcgcaac
ttcgagaacaccgaggaagacgaggacctgacgcccctggcggccttcctcggccatgcc
tccctggaagccggcgacgcccaggcggacgagcacgaagacagcatccagctgatgacc
ctgcacagcgccaagggcctggaattcccctatgtgttcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcctggaagagcccggccgtctcgaagaagaacgccgcctg
gcctacgtcggcatcacccgggccatgcagaacctggtcatgacctatgccgagacccgg
cgcttgtatggcagcgagacctacaacaaggtctcgcgtttcgtacgcgaagtacccaag
ggcctgatccaggaagtgcgcctgtccaacagcgtcagccggcctttcggcggcggccag
tcccagagcaccagcagcctgttcagcggcagcgcgatcccggaaaccggcctgagcctg
ggccaggcggtacgccacgcggtgttcggcgacggggtgatcctcaacttcgaaggctcc
ggggcccaggcccgagtccaggtgaacttcagcgaaggcagcaagtggctgatgctgggc
tacgccaagctggaagccatctaa
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