Photobacterium piscicola: ACJZU6_01110
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Entry
ACJZU6_01110 CDS
T11087
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppil Photobacterium piscicola
Pathway
ppil03030
DNA replication
ppil03410
Base excision repair
ppil03420
Nucleotide excision repair
ppil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACJZU6_01110 (polA)
03410 Base excision repair
ACJZU6_01110 (polA)
03420 Nucleotide excision repair
ACJZU6_01110 (polA)
03440 Homologous recombination
ACJZU6_01110 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppil03032
]
ACJZU6_01110 (polA)
03400 DNA repair and recombination proteins [BR:
ppil03400
]
ACJZU6_01110 (polA)
Enzymes [BR:
ppil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACJZU6_01110 (polA)
DNA replication proteins [BR:
ppil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACJZU6_01110 (polA)
DNA repair and recombination proteins [BR:
ppil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACJZU6_01110 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACJZU6_01110 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XLM58297
LinkDB
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Position
1:complement(225232..228003)
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AA seq
923 aa
AA seq
DB search
MATIPENPLILIDGSSYLYRAYHAAPNFTNSDGEPTGAIYGVVNMLRSMLRQFSTDRIAV
IFDAKGKTFRDDIYPEYKANRPPMPDDLRGQIEPLHAVIKAMGLPLIAISGVEADDVIGT
LATQASKQGMPVLISTGDKDMAQLVDQHVTLINTMTDVVMDAAGVKDKFGIGPELIIDYL
ALMGDKVDNIPGVPGVGEKTATALLQGLGGLDTLYANLDDIAPLGFRGSKTMAKKLLDNK
EAAYMSYKLATIKLDVELELAPEQLCKGVPDTDALTELFGKLQFRRWLTEMLDGSDGRIV
ADESAATTTTEPKVVAPTIDRSGYETVLDEVSFNNWVAQLKNADVFAFDTETDGLDYMTA
NLIGVSFAVEEGKAAYVPVAHDYLDAPAQLDRDWVLAQLKPLLEDKTLAKVGQNLKFDAS
IVARYGIDMQGIKFDTMLESYVYNSVVGRHDMDSLALRYLEHKNISFEEIAGKGKKQLTF
NQIDLEQAGPYAAEDADITLRLHHALYPKVAADEKLNKVFETIEMPLVPVLSRMERTGVY
IDSALLGAQSIELAQRLDEIEKLAYELAGEEFNLSSPKQLQAILFEKMALPVIKKTPSGT
PSTNEEVLQELALDYPLPKLLLEYRGLAKLKSTYTDKLPKMVNVATGRVHTSYHQSGTVT
GRLSSSEPNLQNIPVRNQEGRRIRQAFVAKPGYKILAVDYSQIELRIMAHLSGDPALLDA
FRHGKDIHAATAAEILGLAIDDVSTEQRRRAKAINFGLIYGMSAFGLAKQLDMGRNEAQD
YMNVYFERYPGVLEYMESTRNSAAELGYVETLFGRRLYLPDIKARNGLRRKAAERAAINA
PMQGTAADIIKLAMIAVDEWVQQQPQGQVSLLMQVHDELVFEVEASVLDSVTAKVRELME
QAATLAVPLIADAGCGDNWDQAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctacgattcctgaaaatccattgatccttattgatggatcctcttacctttatcgc
gcttaccatgccgcacccaatttcactaattcagacggtgaaccaacaggtgcaatttat
ggtgtggttaatatgttacgcagcatgttacgtcagttttcaactgatcgtattgcggtt
atctttgatgctaaaggtaagacattccgtgatgatatataccctgaatataaagctaat
cgcccaccgatgccggatgatcttcgcggtcagattgaaccattacatgcagtgatcaag
gcgatgggattgccgttgatcgcgatctctggcgttgaagcggatgatgtgatcggtacg
ttggcaactcaggcttctaaacagggaatgccggtattgatcagtactggtgataaagac
atggcgcaactggttgatcaacatgttactttgatcaataccatgacggatgtagtgatg
gatgccgctggcgttaaggacaaatttggtattggccctgagctgattatcgattactta
gcgttaatgggggataaggttgataatattcctggcgttcctggtgtcggtgaaaaaacg
gcgacagcattattgcaaggtcttggtggcttagatactttgtatgccaatcttgatgat
attgcgccgctaggctttcgtggctcaaaaaccatggctaaaaagctgcttgataataaa
gaagcggcttacatgtcgtataaattagcgactattaagctggatgttgaattagaactt
gcccctgaacaattatgcaaaggcgtaccagacactgacgcactgactgaattatttggt
aaattacagttccgtcgctggctaactgaaatgttggatggcagtgatggtcgcattgtt
gctgatgaaagtgccgcaaccaccacaactgagccaaaagttgttgcaccaaccattgat
cgtagtggttatgaaaccgtacttgatgaagtaagttttaataactgggtagcccagtta
aaaaatgccgacgtatttgcgtttgatactgaaaccgatggtcttgattacatgacagcc
aatttaattggggtttcatttgcggtagaagaaggtaaagcggcttatgtccctgtggct
cacgattatttagatgcgccagcgcaacttgatcgtgattgggtgttagcacaattaaaa
ccattattagaagataagactttagctaaagtcggtcagaatttaaaatttgatgccagc
attgttgcgcgatatggcattgatatgcagggtattaaatttgataccatgcttgaatct
tatgtttataacagcgttgtcggtcgccatgatatggacagccttgcgctgcgttatctt
gagcataaaaatatcagttttgaagagattgcgggtaaaggtaaaaagcaattgaccttt
aaccaaatcgatcttgagcaggcgggtccttatgctgctgaagatgctgatattacgtta
cgccttcaccatgcgttatatccaaaagttgccgctgatgaaaagctgaataaagtgttt
gaaacgattgaaatgccgttagtccctgttttatctcgtatggaacgtactggtgtttat
attgatagtgctttgttaggcgcgcaatctatcgagttggcacaaaggttagatgaaatt
gaaaaactggcttacgaattagcaggtgaagaatttaatttaagttctcctaagcaatta
caagcaatcttgtttgagaaaatggctttaccagttattaaaaaaactccatcaggcaca
ccatcgaccaatgaagaagtgctacaagaacttgctttagattacccattaccaaaatta
ttattagaataccgtggcttagcaaaactaaaatccacttatactgataaattgcccaaa
atggtgaatgtagcaacaggtcgagttcacacgtcttatcaccaatctggaaccgtaacg
ggacgcttgtcttcaagtgagccgaacctgcaaaatattccggttcgtaatcaagaagga
cgtcgtattcgtcaagcgtttgttgccaaaccgggctataaaattcttgctgtcgactac
tctcaaattgaattgcgtattatggcgcatctttctggtgatccagcattattggatgca
ttccgtcatggtaaagatattcacgcagcaacggcggcggaaattttaggattagcgatt
gatgatgtgagtaccgaacaacgtcgacgtgcaaaagcgatcaacttcggactgatttat
ggcatgagtgcatttggtttagccaagcaacttgatatgggtcgtaatgaagcacaagat
tatatgaatgtgtattttgaacgctaccctggcgttttagaatacatggaaagtacccgt
aatagtgcggctgagttaggttatgttgaaactctatttggtcgtcgtttgtatcttcct
gatattaaagcgcgtaatggcttacgtcgtaaagctgctgaacgcgcagcgattaacgcc
ccaatgcaaggtactgcggctgatattattaaattagccatgattgcggttgatgaatgg
gtacaacagcaaccacaagggcaagttagtttgttaatgcaagtacacgatgaattggtg
tttgaagtagaagcctcagtattagacagcgttaccgctaaagtacgcgagttaatggag
caagcggcaaccttagccgtaccattaattgccgatgcaggttgtggcgataactgggat
caagctcactaa
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