Photobacterium piscicola: ACJZU6_01180
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Entry
ACJZU6_01180 CDS
T11087
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppil Photobacterium piscicola
Pathway
ppil00300
Lysine biosynthesis
ppil00470
D-Amino acid metabolism
ppil01100
Metabolic pathways
ppil01110
Biosynthesis of secondary metabolites
ppil01120
Microbial metabolism in diverse environments
ppil01230
Biosynthesis of amino acids
Module
ppil_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACJZU6_01180 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACJZU6_01180 (dapF)
Enzymes [BR:
ppil01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACJZU6_01180 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
YNQ4_N
Motif
Other DBs
NCBI-ProteinID:
XLM58310
LinkDB
All DBs
Position
1:complement(241791..242621)
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AA seq
276 aa
AA seq
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MQINFSKMHGLGNDFVVVDCVTQNVFFSPDAIRRLADRHRGIGFDQLLVVEPPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVSMKGLTNKYHISVSTKAGKMILKLESDGQVTVNM
GAPNFEPAKIPMRAKQAEKTYLLRVGEQTLFCGAVSMGNPHCVTIVDSVATAAVEKLGPL
LESHERFPERVNAGFMEVIDRGTVKLRVYERGAGETQACGSGACAAVAVGRSQGLLDENV
KVCLPGGDLYIRWAGEGKPLFMTGPVAHVFDGQFIQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcagattaacttctccaaaatgcatgggctcggcaatgactttgttgttgtagattgt
gtaacacaaaatgtatttttttcaccggatgcgattcgccgtttagcggatcgtcatcgt
gggatcggttttgaccaattattggtggttgaaccgccttatgatcctgaaacggacttt
cattaccgtatttttaatgctgatggtagtgaagtcgaacaatgtggcaatggcgcccgt
tgttttgctcgctttgtttcaatgaaaggtttaaccaacaaataccatatttccgtgagt
actaaagcaggaaaaatgatattgaagttggaaagtgacggccaagttacggttaacatg
ggcgcccctaattttgaacccgctaaaattccgatgcgagcgaaacaggcagaaaaaacc
tatttattgcgtgttggtgaacaaacgttattttgtggtgctgtcagcatgggtaaccca
cactgtgtcacgattgtcgatagtgtggcgacagctgcggttgaaaagctggggccatta
ctggaatctcatgaacgtttccctgagcgagtgaacgcaggtttcatggaagtgattgat
cgtggcaccgtgaaattacgtgtttatgaacgtggtgcgggtgaaactcaggcttgtggc
agtggtgcttgtgccgctgttgctgttggtcgtagccaaggtttactcgatgaaaatgtt
aaagtctgcttaccgggtggtgatttatatattcgctgggcaggtgaaggcaaaccgtta
tttatgaccggtcccgttgcccatgtgtttgatggccaatttattcaataa
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