Photobacterium piscicola: ACJZU6_03085
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Entry
ACJZU6_03085 CDS
T11087
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppil Photobacterium piscicola
Pathway
ppil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACJZU6_03085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppil03021
]
ACJZU6_03085
03400 DNA repair and recombination proteins [BR:
ppil03400
]
ACJZU6_03085
Enzymes [BR:
ppil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACJZU6_03085
Transcription machinery [BR:
ppil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACJZU6_03085
DNA repair and recombination proteins [BR:
ppil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACJZU6_03085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF4843
Motif
Other DBs
NCBI-ProteinID:
XLM58649
LinkDB
All DBs
Position
1:629248..630237
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVEGKDEVILTLNKSGAGPVVAGDITHDGD
VEIANPEHVICHLTDDNAELSMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSPV
DRIAYAVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRVP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccgcgtctagttgacatcgaacaagtcagc
tctacgcacgcaaaagtaactctagagccgttggagcgtggtttcggccacactctagga
aacgctcttcgtcgtattttattatcttctatgccaggttgtgctgtaacagaagttgaa
atcgacggtgtgttacatgagtacagcaccaaagaaggcgttcaggaggatatccttgaa
attcttcttaaccttaaaggtctagccgttaaggttgagggtaaagatgaagttattctt
actctgaacaaatctggtgcaggccctgttgttgcaggtgacatcacccatgatggtgat
gttgagattgcgaacccagaacacgtaatctgccatttaactgatgacaatgctgaatta
agcatgcgcatcaaggtagaacgtggtcgtggctacgtaccagcatcagctcgtattcac
actgaagaagatgagcgtccaattggtcgtttgttagtagatgctacttacagcccagtg
gaccgtatcgcttacgcggtagaggcagcacgtgtagaacaacgtactgacctagacaag
cttgtaatcgatatggagactaacggtacacttgatcctgaggaagctatccgccgtgca
gcaacaattcttgctgaacaattggatgcgtttgtagatcttcgcgatgtacgagttcct
gaagagaaagaagagaagccggagttcgatccgatcctactgcgtcctgtagacgatctt
gaactaactgttcgctctgctaactgtctgaaagcagaagcgatccattacatcggtgat
cttgttcagcgtactgaggttgagcttcttaaaacgccaaaccttggtaagaagtctttg
acagaaatcaaagatgtattggcatctcgtggtctatctctaggtatgcgcctagaaaat
tggccacctgcatcaatcgctgaagattaa
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integrated database retrieval system
