Photobacterium piscicola: ACJZU6_03765
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Entry
ACJZU6_03765 CDS
T11087
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppil Photobacterium piscicola
Pathway
ppil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJZU6_03765 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppil03019
]
ACJZU6_03765 (pcnB)
Enzymes [BR:
ppil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACJZU6_03765 (pcnB)
Messenger RNA biogenesis [BR:
ppil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACJZU6_03765 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
XLM58763
LinkDB
All DBs
Position
1:complement(780718..782148)
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AA seq
476 aa
AA seq
DB search
MGCIIFNRVANFCRKVLNRDSSTRVPEEQTLQVYQRPEHGISRKDISENALKVLYRLNKA
GYDAYLVGGGVRDLLLHKQPKDFDIATNATPEEIKKLFRNCRLIGRRFRLAHILFGRDII
EVATFRGHHSDAPIQVTPPKDKQKPQLSSRSEEGMLLRDNVYGTIEEDAERRDFTINALY
YSVKDFTVTDYAKGIEDLNNRVIRLMGDPETRYREDPVRMLRAVRFAVKLDMDIDPVTAA
PIRELATLMQDIPSARLFEESLKLLQSGQGLETYRMLREYNLFQQLFPILSDHFTENNSS
KTEKMIEHILASTDKRMAEDKRVNPAFIYAAMLWYPMMTRAEEVSFASGLSFYDAFMVAS
NDILDEQVRSIAIPRRHTTTVRDIWQQQLRFSRRSGKRAFKTMEHPKFRAAYDFLEMRSL
FEGSDIKELALWWNEFQDADYNQRGQMVTHINDGGARRPRRRRPQQPRRKKPQVKS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtattatctttaatcgagtagccaacttttgccgtaaagtattgaatcgcgac
agtagtactcgcgttccagaggaacaaactttgcaagtttaccaacgcccagagcacggc
atttcacgaaaagatatcagcgaaaatgcgctgaaagtactatatcgtctaaacaaagct
ggttacgacgcttaccttgttggtggcggcgtccgcgatttattgctccacaaacagccg
aaagacttcgatattgcaaccaatgcaacacctgaagaaatcaaaaaactgtttcgtaac
tgtcgtttaatcggccgtcgtttccgtcttgctcacatcctatttggacgtgacattatt
gaagtagcaacctttcgaggccaccactcagacgcgccaatacaagtgacaccgcctaaa
gataagcaaaaaccacagctctcttctcgcagtgaagaaggcatgttattacgtgataat
gtttacggcaccatcgaagaagatgcagagcgccgtgactttactattaacgcactttat
tacagcgttaaagacttcaccgttactgactatgccaaaggtattgaagatctcaataat
cgtgtaattcgattaatgggtgatccagaaacccgttaccgtgaagatcctgtacgtatg
ctacgagcggtacgctttgctgttaagctagacatggatatagatcctgttaccgctgcg
ccaattcgtgaactcgcaacactgatgcaagatattccatctgcgcgtctgtttgaagaa
agccttaagctactgcaatcgggtcaaggtctagaaacttaccgtatgctgcgtgaatac
aacttattccagcagttattccccattttatctgaccatttcacggagaataacagcagc
aaaacagagaaaatgatcgagcatatccttgcctcgaccgataaacgaatggctgaagat
aaacgtgttaatccagccttcatttatgctgcaatgctgtggtatccaatgatgacccgt
gcagaagaagtctcttttgccagtggcttatcattctatgatgcctttatggttgccagt
aacgatattcttgacgaacaagtgcgctccattgcgattccacgtcgccataccacgacc
gttcgcgatatctggcagcaacaattgcgctttagtcgtcgtagcggtaaacgtgccttt
aagaccatggaacaccctaaattccgtgccgcttatgatttcttagaaatgcgtagcttg
tttgaaggcagcgatatcaaagaattagcactatggtggaatgagttccaagacgcagat
tacaaccaacgcggtcaaatggtaactcacatcaatgatggtggtgctcgtcgtccacgt
cgtcgtcgcccacagcaaccacgtcgtaaaaaaccacaagtaaaatcatga
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