Photobacterium piscicola: ACJZU6_06480
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Entry
ACJZU6_06480 CDS
T11087
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ppil Photobacterium piscicola
Pathway
ppil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACJZU6_06480 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppil03400
]
ACJZU6_06480 (uvrB)
DNA repair and recombination proteins [BR:
ppil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACJZU6_06480 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACJZU6_06480 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
UB2H
AAA_22
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
XLM59184
LinkDB
All DBs
Position
1:1310532..1312559
Genome browser
AA seq
675 aa
AA seq
DB search
MSKLFSLVSDYSPAGDQPTAIAQLMDGLDSGLAQQTLLGVTGSGKTFTIANVIAQANRPT
LIMAPNKTLAAQLYGEMRDFFPDNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALMERRDVIIIASVSAIYGLGDPESYLKMMLHVRRGDVLNQRDILRRLAELQ
YKRNDAVFERGTFRVRGEVIDIFPAESEKEAIRLELFDDEVEVISSFDPLTGAIIQRNLA
RTTIYPKTHYVTPREKILEAIEGIKLELTQRKQQLLDNNKLVEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPADGLLIIDESHVTVSQIGAMFRGDRSRKE
NLVEYGFRLPSALDNRPMKFEEFESLAPQTIYVSATPGTYEIEKSAGDIAEQVVRPTGLL
DPEIEVRPVATQVDDLLSEIHIRSAKQERVLVTTLTKRMSEDLTEYLTEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTM
GRAARNIEGKAILYGDRITGSMERAINETQRRREKQIIYNLEHNIVPQKLNKKIGDLLEL
GAPSGRTKSRNKAAELHKVAESKGTYSVLTPQQLELEIQRLEKQMYDFAQNLEFEQAAET
RDKIHQLRQQFIANS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagctgttcagtcttgtatctgattattcaccagcgggcgatcaacccacggcc
attgcacaattgatggatgggcttgattctggtcttgcacagcaaacgctacttggggtt
acaggctcgggtaaaacttttacgatagccaatgtgattgctcaagctaatcgtcccacg
cttattatggcccccaataaaaccttagcagctcagttatatggtgagatgagagatttt
tttcctgataatgccgtagagtattttgtttcttactacgattattaccagcctgaggct
tatgtacctaccacggatacatttattgaaaaagacgcctccgttaatgcccatattgaa
caaatgcggttgtcagcaaccaaagcattaatggaacggcgcgacgttattattatcgca
tcagtatcggctatttatggtttgggtgatccggaatcttatttaaaaatgatgttacat
gtacgtcgtggtgatgtactcaatcaacgtgacattcttcgtcgcttagctgaactgcaa
tataaacgtaatgatgctgtctttgagcgaggtacgtttcgagttcgaggggaagtgatt
gatattttcccagccgaatcagaaaaagaagcgattcgattagaattatttgatgatgaa
gttgaagttatttcatcatttgatcccttaactggcgccattattcaacgtaatttagcc
cgtacgacgatttatcctaaaacacactacgtgacacccagagagaaaattcttgaagcc
atcgaagggattaaattagagttaacccagcgtaagcaacaattgttagataataataaa
ttggttgaagaacagcgtatttcacagcgaacgcaatttgatatcgaaatgatgaacgag
cttggtttttgttctggtatcgaaaactattcacgttatctcagtggtcgtgctgagggt
gagccgccaccaacattatttgattatcttcctgccgatggtttattaattattgatgaa
tcacacgttactgtgtctcaaataggggctatgttccgtggcgatcgctctcgtaaagaa
aatctggtggaatatggttttcgattaccgtcagcgctagacaatcgtccaatgaagttt
gaagagtttgaatctctagcacctcagacaatttacgtttcagcgacaccaggtacttat
gaaattgaaaaatcagcaggtgatattgctgagcaagtggtacgtcctacaggtttgctt
gatcctgaaatagaagttcgacctgtagcaacacaagttgatgatttactttctgaaatc
cacataagatctgctaaacaagagcgagtgttagtgacgacgttaactaagcgaatgtca
gaagatcttactgaatatctaactgaacatggtgttaaagtacgttatcttcactctgat
atcgatacggttgaacgggttgaaattattcgtgatttacggttaggtaaatttgatgtg
ttagttgggattaacttacttcgagaaggactcgatattcctgaagtctcattggtggct
attttagatgcggataaagagggttttttacgttcagaacgatccttgattcaaaccatg
ggacgagctgcacgtaatattgaaggtaaggctattttatatggtgatcgtattactggt
tctatggaacgggctattaatgaaacccaacgtcgccgtgaaaaacaaattatatataac
cttgagcacaatattgttcctcaaaaattgaataagaaaattggtgatttattagaactg
ggtgcgccgagtggaagaactaaatctcgaaataaagccgctgagctacataaagtggcg
gaatcaaaagggacttattcggtattaacaccgcaacaattagagcttgaaattcagcgt
ttagaaaaacaaatgtatgattttgcacaaaacttagagtttgagcaagctgctgaaacg
cgggataaaattcatcaattaaggcagcaatttattgctaacagttaa
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