Photobacterium piscicola: ACJZU6_07110
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Entry
ACJZU6_07110 CDS
T11087
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppil Photobacterium piscicola
Pathway
ppil03030
DNA replication
ppil03430
Mismatch repair
ppil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACJZU6_07110
03430 Mismatch repair
ACJZU6_07110
03440 Homologous recombination
ACJZU6_07110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppil03032
]
ACJZU6_07110
03400 DNA repair and recombination proteins [BR:
ppil03400
]
ACJZU6_07110
Enzymes [BR:
ppil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACJZU6_07110
DNA replication proteins [BR:
ppil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACJZU6_07110
DNA repair and recombination proteins [BR:
ppil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACJZU6_07110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XLM59301
LinkDB
All DBs
Position
1:complement(1465203..1465952)
Genome browser
AA seq
249 aa
AA seq
DB search
MFHHGSKQPTSAHFTRNMPVPDWHLRFKTLAQEAQDSRIKSYYETGIVSEDTPLSEVPFV
ALDFETTGLNSEIDDIVSIGLVPFDLHRIYCRQSQHWVVKPKVKLEEDSVVIHGITHSDV
QQAPDLRRILESVLDALAGKVVVVHYKNIERQFMDRALDIRLGEGIQFPVVDTLAIEATI
QQQQISGLWNKLKGKRPGSVRLGKCRSRYGLPAYQPHHALTDSLATAELLQAQIAYHFTP
ETPIGYLWE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatcacggatcaaaacaacctacttctgcacactttacacgtaatatgccagta
ccagactggcatttacgttttaaaacattagcgcaagaagcacaagatagccgcattaaa
tcttattatgagacaggtattgtctctgaagatacgccactgagtgaggtgccttttgtt
gctctcgactttgaaacaacaggactcaactcagaaatcgatgacattgttagtatagga
ttagtcccttttgacttacaccgtatttattgccgccaatcgcaacactgggtggtaaaa
cctaaggtaaaattagaagaagactcggttgttattcatggtattacccactctgatgtg
caacaagcacctgacttacgccgtatccttgaatcagtgctagacgctttggctggaaaa
gtggttgtcgttcattataaaaatattgaacgccaatttatggatcgcgccttagacatt
cgtttaggcgaaggaattcaatttccagttgttgatactttagctattgaagcaaccatt
cagcagcaacaaattagtggtttgtggaataaattaaaaggtaaacgcccaggttcagta
cgactaggtaaatgccgttcccgttatggccttccagcctatcagccacatcatgcgcta
accgattctttagcgactgctgaattacttcaagcacaaatcgcttatcattttacacct
gagacacctattggatacctttgggaataa
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