Photobacterium piscicola: ACJZU6_07520
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Entry
ACJZU6_07520 CDS
T11087
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppil Photobacterium piscicola
Pathway
ppil03420
Nucleotide excision repair
ppil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACJZU6_07520
03430 Mismatch repair
ACJZU6_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppil03400
]
ACJZU6_07520
Enzymes [BR:
ppil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACJZU6_07520
DNA repair and recombination proteins [BR:
ppil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACJZU6_07520
MMR (mismatch excision repair)
Other MMR factors
ACJZU6_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
ResIII
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
XLM59375
LinkDB
All DBs
Position
1:1567247..1569565
Genome browser
AA seq
772 aa
AA seq
DB search
MTRFTAEQTAFIHHQSGNALCVAGAGTGKTTTLVGVVEHKLQSIAAEQMLVLMFNRDIRT
DFKEKLAQIPLAARVPVHTFHSFCFQLLRQSGYLSTTGYQIDFNNGDSDKTIAKLVLRQM
AAQEKSYQKQQTFKDPRTIELLMSFIGLVKAHMLPPKEVFDLSEINREYAFIIEAFWNFE
TVRKERKQLFFDDWLVETIQLLKNDQALCHYYHQQIKFMMVDEFQDINTAQYQLLKLLLS
PQAQLVAVGDVDQCIYKWRGSAPQFMLNFEQDFAPATTYSLSHTFRFGHSLALAASHLIA
NNKQRFHDFQTIAHKSVADTAVDVIGTARQVGEIAQSVADFIQQGGQPAEVAILVRRWSQ
AMLFELAFLTKKIPYHMPIGSVLTHSREVKLLMDVMILATGRFLTLADNDKANLLFNLLS
FPHCYVPNKSLRPLCESLSQRPSNEWLSLIKQTEKIQPTLNLETFKDRIELLLMLQRKGK
FKALAVYKQYRRDSELDNWIWKTEATATEIEEAVERLDSVETVLESMDQNCDKALQYFEY
YTQQSAAENQSHQNNSVQLTTIFRAKGCEYSQVHLPYWDKDAFPYVNRSSLGISADTEEE
RRLAYVAITRAKHSAKIYYTVENTKKDQYVRKDKNASQFILESKADVAQEIGPQLYHDGE
LPYHKSPVVQGYYRRLGRIDDMQLPPKVVAISLPEINTAGESVYSYEWALQQPIPDKADK
LIRSMVQTKTTKYLETEVIRIIRELKQAGTEKQKVLINRLIVVARAKARKYS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttttactgctgaacaaactgcttttattcatcatcagtcaggtaacgcactt
tgtgttgctggtgcgggaacggggaaaacaacaacgttagtcggtgttgtagaacataaa
ttacaatcaatcgcagcagaacaaatgttggtattgatgtttaaccgtgatattcgcacc
gattttaaggaaaagttagcacagatcccgttagccgcgcgcgtgcctgtccatactttt
catagcttttgttttcagctattaagacagtcggggtatctatctacgacgggttaccaa
attgattttaataatggtgatagtgataaaaccattgctaaacttgtcttacggcaaatg
gcggcacaagaaaaatcgtatcaaaaacaacaaacgtttaaagatcctcgcactattgaa
ttgttaatgagctttattgggttagtcaaagcacatatgttgccgcccaaagaggtattt
gatctctctgaaattaatagagaatatgcctttatcattgaagcattttggaactttgaa
actgtacgtaaagagcgtaaacagctattttttgatgattggctggtagaaactatacag
ttattaaaaaatgatcaagctctatgccattactatcatcagcaaattaaatttatgatg
gttgatgaatttcaagatataaacaccgcgcaatatcaattgttgaaattactattatca
ccacaagctcagttagttgcggtaggtgatgttgatcagtgtatttataaatggcggggt
agtgctccacaattcatgcttaattttgaacaagattttgcgccagcaacgacatatagt
ttgtcgcatacgtttcgatttgggcatagtttagcattagcggctagccatttaattgct
aataataaacaaagatttcatgactttcagaccattgcgcataaatctgttgcggatact
gctgtggatgttattggtaccgctcgccaagtgggagaaattgcgcaatcagtggctgat
tttattcaacaaggtggtcaacctgctgaagtggctattttagttagacgttggtcacag
gcgatgttatttgaattagcttttttaacaaagaaaataccttaccatatgccgatcggt
tcggtgttaacacacagtcgtgaagtaaagttgttaatggacgttatgatattagcaacg
gggcgttttttaacattagcggataacgataaagccaatttattgtttaatttattatct
tttccacactgctatgtacctaataaaagtttacgcccattgtgtgagtctttatcacag
cggccaagtaacgaatggcttagtttaataaagcaaactgaaaaaattcaacctacatta
aatctagaaacgtttaaagatcggattgaattattattaatgctgcaacgaaaaggaaag
tttaaagcgctggcggtttataagcaatatcgtcgagacagtgaacttgataattggatt
tggaaaacagaagcaacggcaacggaaatagaagaagccgttgaacgtttagacagtgtt
gaaaccgtattagaatcaatggatcaaaactgtgataaagctttacagtattttgaatat
tatactcaacagtctgcagctgaaaaccaatcacaccaaaataacagtgtgcaactaacc
actattttcagagctaaaggatgtgagtatagtcaggtacatttaccttattgggataaa
gatgcttttccttatgttaatcgatcatcattgggtatttcagcagatacagaagaagaa
cgtcgacttgcttatgtagcaataacacgtgccaagcatagtgccaaaatatattatacg
gttgagaataccaagaaagatcaatatgtgcgtaaagacaaaaatgccagtcaatttatt
ctagaatctaaagctgatgttgcgcaggaaattggccctcaactttatcatgatggtgag
ctgccataccataaatcacctgttgtgcagggatattatcgtcgtttaggtcgtattgat
gacatgcaattaccaccaaaggttgttgctatttctttgcctgagataaatacagcagga
gaaagtgtttatagctatgagtgggcattacaacaaccgataccggataaagctgataaa
ttgattcgtagtatggttcaaacaaaaacgactaaatacttagaaactgaagtaatacgt
attattcgagaattaaaacaagcaggcacggagaaacaaaaggtattgattaatcgtctt
attgttgttgcccgtgccaaggcgcgtaaatatagctaa
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