Photobacterium piscicola: ACJZU6_11480
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Entry
ACJZU6_11480 CDS
T11087
Name
(GenBank) H-NS family nucleoid-associated regulatory protein
KO
K03746
DNA-binding protein H-NS
Organism
ppil Photobacterium piscicola
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppil03036
]
ACJZU6_11480
03400 DNA repair and recombination proteins [BR:
ppil03400
]
ACJZU6_11480
Chromosome and associated proteins [BR:
ppil03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
ACJZU6_11480
DNA repair and recombination proteins [BR:
ppil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACJZU6_11480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6604
DUF6952
DUF7856
FapA_N
PaaX_C
DUF6594
Motif
Other DBs
NCBI-ProteinID:
XLM57583
LinkDB
All DBs
Position
1:2423019..2423414
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AA seq
131 aa
AA seq
DB search
MSDAMKALLNLRSLRALSREYTLEQLEEALDKLTTVVTERSEAEAEEQAKENERNEKLAQ
YREMLLADGIDPEELLASLAKAPKTKRATRPAKYKFIDENGDEKTWTGQGRTPSALKKAL
DDGQSLDEFEI
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcaatgaaagcgcttttaaaccttcgaagcctacgcgcactttcgcgcgaa
tatacactagagcaacttgaagaagcgttagataaactaacaacagttgttactgaacgt
tcagaagctgaagctgaagaacaagctaaagaaaatgagcgtaatgaaaaactagctcaa
tatcgtgaaatgctattagccgacggtattgacccagaagaattactagcaagtttagca
aaagcaccaaaaactaaacgtgcaactcgtccagctaaatataaattcatcgatgaaaat
ggcgatgaaaagacatggacaggccaaggccgtacgcctagcgcgctaaagaaagcatta
gatgatggtcaatctcttgatgagtttgaaatctaa
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