Photobacterium piscicola: ACJZU6_11765
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Entry
ACJZU6_11765 CDS
T11087
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppil Photobacterium piscicola
Pathway
ppil03030
DNA replication
ppil03430
Mismatch repair
ppil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACJZU6_11765 (dnaX)
03430 Mismatch repair
ACJZU6_11765 (dnaX)
03440 Homologous recombination
ACJZU6_11765 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppil03032
]
ACJZU6_11765 (dnaX)
03400 DNA repair and recombination proteins [BR:
ppil03400
]
ACJZU6_11765 (dnaX)
Enzymes [BR:
ppil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACJZU6_11765 (dnaX)
DNA replication proteins [BR:
ppil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACJZU6_11765 (dnaX)
DNA repair and recombination proteins [BR:
ppil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACJZU6_11765 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_4
RuvB_N
AAA_5
AAA_22
AAA_14
AAA_16
AAA_2
ResIII
AAA_19
AAA_18
TsaE
nSTAND3
AAA_7
PIF1
TniB
AAA_assoc_2
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
XLM57640
LinkDB
All DBs
Position
1:complement(2487478..2489604)
Genome browser
AA seq
708 aa
AA seq
DB search
MSYQVLARKWRPYQFADVVGQSHVLTALGNALEQNRLHHAYLFSGTRGVGKTTIARIFAK
GLNCEQGITATPCGKCTTCREIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHLDH
QQIHAQLDKVLTEEKVEYEARALALLARAAEGSMRDALSLTDQAIALGNGNVSAETVATM
LGTLDTDQALSLLEAVATADANTAMASLQQLASIGIEWDSLLRELSAQLHRVAMFQALPA
SLDDSLPDAERINLLSQLMTPQDVQLCYQICLQGRQDLSFAPDGRTGLEMVLLRMLAFRP
VSGGSITPQAIVVPSSQPAPLVAPATSGVSRVQALKAQMQTPATNNIQSMVAPVVAPQSA
APMAPAPMPDVIVAPAPQEQSSVPQPPQPVTQPSIDAAPVRPSAASGLLAARNQLRSQTK
RGQDGQTTSTSPKKDLTTPAKKVATSVMDRIASKQTSMPTMKSHAMPASTVANNATEDDE
YRWKPMAKPALEADVKPELTPRVLKRALEHEKTPEMAKLLVNEAANQDSWSQLVTQLDVP
KLIQQLALNSAFERVDDHITLYLRSAQKHLQADRATAQLNSALSEVLQAPVQLSIVLGEQ
GQTPLELRESLYQQKLLQARDSLANDPNVNFICQRFAAQLDEESIRPV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctggcccgaaaatggcgtccctaccagtttgctgatgtggttgga
caatcacacgtattaactgcactaggtaatgccttagagcaaaatcggcttcaccatgct
tatctttttagtggtacgcgtggagtaggtaaaacgacgattgcacgtatttttgctaaa
gggttaaattgtgagcaaggcatcacagctacgccttgtggtaaatgtacaacctgtcgt
gaaattgatgaaggacggtttgttgatctgctagaaattgatgctgcatcacgcactaaa
gttgaagatacacgtgaattgttggataacgtgcagtataaacctgcacgtggtcgcttt
aaagtttatctgattgacgaagtgcacatgctttcacgtcatagttttaatgcattattg
aaaacattagaagagccaccagaatatgtgaaattcattctggcgacgactgatccgcaa
aaattaccagtaacgattttatcgcgttgcttacagtttcatttaaaacatcttgatcac
caacaaatccatgcccaactcgataaagtcctaacggaagagaaagtcgagtatgaagcg
cgtgcattagcgttgctagctcgtgcagctgaaggcagtatgcgtgatgcattaagttta
acagaccaagcgattgcattgggtaatggtaatgttagtgctgaaactgttgcgacaatg
ctaggtacattagataccgatcaagcgttgtcattacttgaagcggtggcaacagctgat
gctaatactgcaatggcaagtttgcagcagttagcctcgatcggtattgagtgggacagt
ttattacgtgaattatcggcacaattgcaccgagtggcaatgttccaagcattaccagca
agtttagatgatagcttacctgatgctgagcgaattaatttattgagccaattgatgaca
ccacaagatgtacaattgtgttatcaaatttgcttacaagggcgtcaagatctgtcgttt
gcacccgatggccgtactggcttagaaatggtgttattgcgtatgcttgctttccgtcct
gttagtggtggcagtattacgcctcaggcgattgtggtgccgagtagtcagcctgcaccg
ttagtggcacccgcgaccagcggtgtctcgcgagtacaagcattaaaagcacaaatgcaa
acaccggcaacgaataatattcaatcaatggtagcacctgttgtcgcacctcagtcggca
gcaccgatggctccagcaccaatgcctgacgttattgttgcgcctgcgccacaggaacaa
tcatcagtgccacagccaccacaaccggtgacgcaaccatcaatagatgctgcgcctgtt
cgaccatcggcagcatcagggttattagccgcgcgtaatcaattacgtagtcagaccaaa
cgtggccaagacggacaaacaacgagcacgtcgccaaaaaaggatctaacgacgccagct
aaaaaagtcgcaacttcagtgatggatcggattgcgagtaagcaaacctcgatgccaaca
atgaaatcccatgcgatgccggcgtcgacagtggcgaataatgcgactgaagacgatgaa
tatcgttggaaaccgatggcaaagccagcgttagaggccgatgttaagcctgagttaacc
ccacgagtattgaagcgcgctttagaacatgaaaaaacgcctgagatggcgaaattactt
gtcaatgaagctgcaaatcaggatagttggtcacagttagtcactcagcttgatgtgcca
aaattaattcagcaattagcattgaattcggcttttgaacgtgtggatgatcacattaca
ttgtatttacgttcagctcagaaacatttgcaagctgatcgagcgacggcacaattaaac
agtgccttgagtgaggtgttacaagcacctgtacaattgtcgattgttttaggcgagcaa
ggtcagacaccgcttgaattacgcgaaagtttgtaccaacaaaaattgctacaagcgcga
gacagtttagctaacgatcctaatgttaatttcatttgtcagcgttttgctgcacaactg
gatgaagaaagtattagacctgtttaa
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