Photobacterium piscicola: ACJZU6_13190
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Entry
ACJZU6_13190 CDS
T11087
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ppil Photobacterium piscicola
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppil03012
]
ACJZU6_13190 (selB)
Translation factors [BR:
ppil03012
]
Eukaryotic type
Elongation factors
ACJZU6_13190 (selB)
Prokaryotic type
ACJZU6_13190 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB_bact
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
PduV-EutP
MMR_HSR1
SRPRB
GTP_EFTU_D4
RsgA_GTPase
GTP-eEF1A_C
MnmE_helical
Qn_am_d_aII
HTH_CHD6-9
Motif
Other DBs
NCBI-ProteinID:
XLM57902
LinkDB
All DBs
Position
1:2787396..2789318
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AA seq
640 aa
AA seq
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MIIATAGHVDHGKTKLLHALTGINADRLPEEQQRGLTIDLGYAFMPYHSTKSNHQQRLGF
IDVPGHEKFLSNMLAGVGTAHHAMLIVAGDEGMMPQSYEHLTILRLLAMDSLTVVITKSD
LTSLEQQLQLEATLHQLLLQYGFTQSTIFHCSAHTNDGIDELKQHLIDLADNEQQYDNTL
NFKLAIDRAFHVKGSGLVVTGTALNGHINVGDNLCLVSHNQLKKGHSQPQIVRIKSIHAQ
GQATESATANQRVALNISGDIDKANLNRGDWLLQIAPKQIIKRITVKLTANHLIKHWQNS
QIFHAATHTTGHIALLEDKQLAPNDSAVAEITFDTPLCLTEQDRLLLRDPAQKINLGSAV
VIDLLPPNRGKRAPQRLEYLNQRAALHSLPDIIAFKLQHAPQSQQQLLEQHQCQISVLNQ
LVTADSSIKQYGDYLCFDSYQQALQQHIIATLEQYHQQAQDTLGIGKDRLYRMTALNQPQ
VIFNAIINQLLNQQLLANTRGWLHLAAHQLQLTPSELQCWHQIEQLMATHPQPWWIRDLA
SEMDENEDSLRKLSYKLAQLSYVAAIVKDRYVSHQYLVQMATAVRQHTTQHQKLETAEFR
DISQLGRKVAIQLLEYFDKIGFTKRKFNYRELKDQDLLQE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgattattgctacagctggccatgtcgatcatggtaaaaccaaactgttacatgccctg
actgggatcaatgccgatcgactgccagaagagcaacaacggggactcacgattgattta
ggctacgcatttatgccgtatcactcaacaaaatctaaccaccaacaacggttaggtttt
attgatgtgccaggccatgaaaaatttctctccaatatgctagctggcgtaggcaccgcc
catcacgcaatgctgattgttgcgggtgatgaaggcatgatgccgcaaagctacgagcat
ctcactattttacgcttactcgcgatggatagtttaacggtggtgatcactaaatctgat
ctcaccagccttgagcaacaactgcaactcgaagcaacattacaccaattattacttcaa
tatggctttactcaatcgactatttttcattgttcagcgcatacaaatgacggtattgat
gaactcaaacaacacctgattgatcttgcggataatgaacagcaatatgacaacaccctc
aattttaagcttgctatcgatcgcgcctttcacgttaaaggttcaggattagttgttact
ggcaccgcattaaatggtcatatcaatgttggtgataacttgtgtttagtgagccataat
cagcttaaaaaaggccatagccaaccgcaaattgtacgaatcaaatctattcatgcacag
gggcaggcaacggaatctgcgacggcaaaccaacgggttgcgctcaatattagtggtgac
attgataaagcaaacttaaaccgtggcgactggttattacagatagcacccaagcaaata
attaaacggatcacggtaaaattaaccgctaaccatctaattaagcattggcaaaatagt
caaattttccatgctgccacccataccacaggccatattgcattattagaagataagcaa
ttagcaccaaatgatagcgcggttgctgaaataacctttgatacgccattgtgtttaacc
gagcaagatcgcttattactccgtgatcccgcccaaaaaataaacctcggcagtgcggta
gttatcgatctattaccgccaaatagaggcaaacgtgctccgcaacgacttgaatacctc
aatcaacgagcagccttacattcactccctgacatcattgcatttaagcttcaacatgca
ccacagtcacagcaacaattgcttgaacaacatcagtgccaaatcagtgttcttaaccaa
ctcgtgaccgctgatagcagcataaaacaatacggtgattacctgtgctttgacagctat
caacaagcattacaacagcatattatcgccacactagagcaatatcatcagcaagcacaa
gacacccttggtataggtaaagatcggctataccgtatgactgcacttaatcaacctcaa
gtaatttttaatgcaattatcaaccaattgctaaaccaacagctgttagcaaatacccgt
ggctggctgcatttagcggcgcatcaattacaattaacaccgtctgaactacaatgctgg
catcaaatagaacaattaatggcaacccatcctcagccttggtggatacgcgatctcgcc
tcagaaatggatgaaaatgaagacagtttgcgcaaactcagttataaactggcgcaatta
agttatgttgctgcgatagtgaaagatcgctatgtcagtcatcaatacctagtacaaatg
gcaaccgcagtgcgccaacatacgactcaacatcagaagttagaaacggctgaatttaga
gacattagtcagttagggcgtaaggttgcaattcaattattagagtattttgataagatt
ggatttactaagcgtaaatttaattatcgcgaattaaaagatcaggatttattacaagaa
tag
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