Photobacterium piscicola: ACJZU6_19740
Help
Entry
ACJZU6_19740 CDS
T11087
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppil Photobacterium piscicola
Pathway
ppil00550
Peptidoglycan biosynthesis
ppil01100
Metabolic pathways
ppil01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACJZU6_19740 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACJZU6_19740 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppil01011
]
ACJZU6_19740 (mrdA)
Enzymes [BR:
ppil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACJZU6_19740 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppil01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACJZU6_19740 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XLM59900
LinkDB
All DBs
Position
2:complement(1131822..1133828)
Genome browser
AA seq
668 aa
AA seq
DB search
MKNKRYRQIRDHKQEKALFIRRAIQAFVGILILTCVLIANLYHLQVEDYSEYKARSNNNS
IKLIPVAPNRGRIYDRNGVILADNIPVCSLEIIPDQVKNLSQVLIQLQQLLGISDKEIVA
FNKAKSQVQAFKPVTLISHMNNKQVAVFSVNEFEYPGVDVDAHLERYYPYGASLTHLLGY
VGKINDRDIAALKKSGKFDNYKATRTIGKLGIEHYYEDLLHGKTGYETVEVNSHGRVVRT
LSYIPPVAGKDLKLTLDINLQLYAQKLLTLQQKDPTTGLMVTKVRRGAIVAMNPKNGAIL
AMVSSPSYNPNLFVNGISSKAYAALLDDPARPLINRATLGLYPPGSTVKPELAAAGLTTG
VITVHTVRNNHGWWRIPNSKSRKFRDDRVQGFANVDIYKAIEKSVNTYFYQVAYDLGIDR
LSMWMTKFGYGQHSGIDIDEDSTGIMPTRSWKMARFHHPWMQGDTVPLGIGQGYWTATPI
QIAKATSVIAEDGVEHRPHLLKDIIDGKVQQPVTFTDFKPLSSVPQKDWAIIKKGMELVV
EKGTASQMFQNMPFQVAGKTGTSQVYSMKDTEHYNANEVAEHFKDHALFTGFAPANDPTI
LVTVVLEHGGWGWHAAPFARDIMEYVLLKPTLRPQSDELVQQPSPSLAGSSNVSKVATKT
VSVVAHSH
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaaacgctaccgccagattcgcgatcataagcaagaaaaagccttattcatt
cgacgagcgattcaagcttttgttggtattttgattttaacctgtgtgttaattgccaac
ctttatcatttacaagtagaagattacagtgaatataaagcgcgctcaaataacaacagt
attaaacttattcctgtcgcgcctaatcggggtcgtatttatgaccgtaatggggtgata
ttagcggataatattcccgtttgctcattagaaataattccagaccaagtaaaaaattta
tcacaagtattaattcaactacaacaattattaggcatctcagataaagagatagtggct
ttcaataaagcgaaatcacaagtacaagcatttaaacctgtcacccttatttcgcacatg
aacaataaacaagtggcggtattttcggttaatgaatttgaatatccaggggttgatgtt
gatgcccatcttgaacgttattatccttatggcgcctcattaacgcatttattagggtat
gtcggaaaaattaatgatcgtgatattgctgctttaaaaaagagcggtaaattcgataat
tataaggcaactcgcactattggtaagttaggtattgagcactactatgaagatttactg
catggtaaaactggctatgaaacagttgaagttaacagtcatggccgtgttgtacgcaca
ttatcttatattccaccggtggctggaaaagatctcaaattaacgcttgatattaatcta
caactttatgctcaaaaattactgacactacagcaaaaagatcctacaacaggcttaatg
gtaaccaaagttcgtcgcggtgctatcgtggctatgaaccccaaaaatggggcgatttta
gctatggtttcaagtccgagctataacccgaatttgtttgttaatggtatttcctcaaaa
gcttatgccgcattgttggacgatcctgcacgtccacttataaaccgtgctacattaggt
ttatatccaccgggttcaaccgtcaaacctgagttagctgcggcagggttaacaacaggg
gttatcacagtacatactgttcgtaataatcatggctggtggcgcattcctaacagtaaa
agccgtaaatttagagatgacagagtgcaaggatttgccaatgttgatatttataaagcg
attgaaaaatcagtgaatacctatttttaccaagtggcttatgatttaggtattgatcga
ttatcaatgtggatgactaaatttggttatggtcagcattcaggcattgatattgatgaa
gattcaaccggtattatgccaacacgatcttggaaaatggcacgttttcatcatccatgg
atgcaaggggatacggtaccacttgggattggccagggttactggactgcgacgccaata
cagatagccaaagccacatcggttattgcagaagatggggttgagcatcgtccgcattta
ttaaaagatatcattgatggtaaagtccaacagcctgttacttttactgattttaaaccg
cttagctctgtacctcaaaaagattgggcgatcattaaaaagggcatggagcttgttgta
gaaaaagggacagccagtcaaatgttccaaaatatgccatttcaagttgcgggtaaaaca
ggaacgagtcaggtttattcaatgaaggatactgaacattacaacgcgaatgaagttgct
gagcattttaaagatcacgctttatttacgggttttgcccctgctaatgatcccactatt
ttagtgactgtagtgttagaacatggtggctgggggtggcatgctgctccatttgcacga
gatatcatggagtatgttttactaaaaccaacattacgtccacaatctgatgagttagtg
caacagccatcgccatcacttgcagggtcaagcaatgtatctaaggttgcaacaaagacc
gtatctgtagtggctcatagtcattaa
DBGET
integrated database retrieval system
