Pyramidobacter piscolens: CE91St28_00890
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Entry
CE91St28_00890 CDS
T08073
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ppio
Pyramidobacter piscolens
Pathway
ppio03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CE91St28_00890 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppio03400
]
CE91St28_00890 (nfo)
Enzymes [BR:
ppio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CE91St28_00890 (nfo)
DNA repair and recombination proteins [BR:
ppio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CE91St28_00890 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BDF77295
LinkDB
All DBs
Position
complement(92042..92884)
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AA seq
280 aa
AA seq
DB search
MPFFGCHLSVAGGFRKMGENAMSIGADTFQFFTRNPRGGAVRAADPDDAAALKSIIAAHR
FGPLIAHGPYTLNPCSADAKVREFALLAMADDLRRLDEQLPGNLYNFHPGSHVGQGCEKG
IDLIVAALNEILPAVKRTAVLLETMSGKGSEVGGDFEQLAEILSRVSCPEKMGVCLDTCH
VYSAGYDIAGDLDGVLDRFDRIVGLKRLRALHLNDSMTPFGSRKDRHEKLGKGSLGLAAF
AALVVHPALAKLPMCLETPQDSLSGWAAEIAQLRRFAANK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccatttttcggctgtcacctttccgtcgccggcggattcagaaagatgggcgaaaac
gccatgtccatcggcgccgacacgttccagttcttcacgcgcaatccccgcggcggcgcc
gtgcgggccgccgatcccgacgacgccgcggcgctgaaaagcatcatcgccgcgcatcgc
ttcggcccgctgatcgcccacggcccctacacgctcaatccctgctcggccgacgcgaag
gtgcgcgagttcgcgctgctggcgatggccgacgatctgcggcgtttggacgagcagctg
ccgggcaatctgtacaacttccatcccggcagccacgtcggccagggctgcgaaaagggc
atcgacctgatcgtggcggcgctgaacgagattttgcccgcggtgaagcgcaccgccgtg
ctgctggaaaccatgtcgggcaagggcagcgaggtgggcggtgatttcgaacaactggcg
gagatcctgagccgcgtcagctgtcccgagaagatgggcgtgtgcctcgacacctgtcac
gtctattcggccggctacgacatcgccggcgacctcgacggcgtgctcgaccgtttcgac
cgcatcgtggggctgaaacgcctgcgcgccctgcacctcaacgacagcatgacgccgttc
ggcagccgcaaggaccgccacgaaaaactcggcaagggcagcctcggcctggccgctttc
gcggcgctggtcgtccatccagccttggcgaagctgcccatgtgcctggaaacgccgcag
gattccctctccggctgggcggccgagatcgcccagctgcggaggttcgcggcgaacaaa
tag
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