Pyramidobacter piscolens: CE91St28_04970
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Entry
CE91St28_04970 CDS
T08073
Name
(GenBank) DNA helicase
Organism
ppio
Pyramidobacter piscolens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4011
MTES_1575
AAA_11
AAA_12
DUF3320
AAA_19
AAA_30
AAA_16
UvrD-helicase
DEAD
ATPase
bpMoxR
IstB_IS21
GvpD_P-loop
cIII
nSTAND3
Adeno_IVa2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BDF77703
LinkDB
All DBs
Position
537939..543851
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AA seq
1970 aa
AA seq
DB search
MDERTAAITLDVQLTPVVNYAQQQNGLPLARRVAVSNDGDADLEDLEVRLFAAEDFVEPA
KFGISRLPAGETAEIGDLKVALRAERLAQLTERVVTTLAAEVWQGEKRLASAVKEVTFLA
FDEWQGSGYYPELLAAFVTPNHPEIARLMKRASKLLEEWTGSPSFDAYQTQNPNRVLRQA
AALYGAIQELNVVYAVPPASFEAAGQRVRLCDAVTGTCLGTCLDLTLLYAACLEAAGLYP
LLLLKNDHIFAGVWLEEMTFQDAVKDDPALVSKRMADGIGEIAVVECTGAAAGKGMTFDE
ARAAAAAEMGDDNPVRYVVDVHRARLAGIRPLPLRVRTDQGWRVEAESRSAAELTAAPEE
MAARVPESAGQSAAQKPLDARGKKILQWERKLLDLGLRNTLLNLRASKNLIPVLAASLPQ
LEDALSDGRQFTVSPRPQEWRLPEGAARSLEPPAELPLSRGLLQSEYQNGRLRSLMGEAE
LQRAVKELYRAAKVSIEENGANSLYLSMGLLRWYETERSERPRYAPLVLLPAELVRKAAN
KGYGLRLRDEEPVMNVTLLEMLKQNFGIVVDGLDPLPSDEHGADVVRVFTAVRRAVMQQK
RWDVIESAFVGIFSFSRFVMWNDIRNRMDDLEKNKVVRSLMDGKLSWEAAPMEPPRELDE
TGLLLPLPVDSSQLYAVKAAVAGETFVLHGPPGTGKSQTITGLIVNALARGKTVLFVAEK
MAALSVVQERLRKLGLDPFCLELHSNKARKKDVLEQLRAAAEAGRAQKTPIYAQKAEQAA
RLRAELAEYPRRLHEKRVSGLSVYEMVNAYEPLADADDAGIRLEYSRTAAWTAADLERNE
SLLGRLAAAARAVGRPCGHPLRLVTETEYSQRLRSQLPALAEDYRARLDASERAARAFAA
RLGLGAPRLKKEYDQLRDIAVELVRWRETPRRWAAENDAGTYLRGVLEMAEHYRAAAEIG
GELLKEYRPAFFEQDGKALRGEWDEIERKWLLPRLLAESGFVRKLSSYALAPRGKEDAPG
DLDRLNAYRAELARAQQLLREYGPGLESLDRGGDTDWRRVDELARNAAQSAVRLDDLSGG
TALRQRHAADPESQRAAAELLTIWQELETSRGALDELLRTENPPDGDDWLAAQKDLCAAL
LDNAEALRDWILWNSLCEEAVAAGLGPVVSACRNGLAHDKVLPAYRKACLCNLIEDAVDG
DPVLNRFSGAVFGEKVSQIKELIDELARLASAEACAVLAARVPDFTREASQNSELGILQR
AIRSGGRNLSIRRLFGQLPNLLPRLCPCMLMSPISAAQYLDPRREMFDLVVFDEASQLTT
SKAVGALARGRDAVIVGDPKQMPPTSFFMTNLDDREEDPEVADLTSILDDCLALGMPETH
LLWHYRSRHESLIAFSNNRFYENKLYTFPSANDRVSKVSFVKIDGTFDRGGSRTNRAEAE
AVVAEVIRRAKDPARRRESVGVVTFNVSQQNLVDDLFEEARGQDPELEKWYQESEEPLFI
KNLENVQGDERDVILFSIGFGADREGRVSMNFGPVNQAGGWRRLNVAVSRSRAEMMVFSS
LEPEQIDLTRTASEGVAALKAFLQYARSGYLPLKASAAGTGALREPDGVAAEICARLNER
GYETARQVGHSKFRVDIGVVDPDQPGEYLLGILLDGGAYRDARMVREREISQIGVLSGLG
WTIERLWTMDWWDNKKRELDRLLRRIEARRAVRREEREARRAAESEAAASAAAAESEAPG
AVMDGGGDVEIPRVPDRAAADGKPEPSSAPVSAPSAAPEKTPRTDARPYRPAQLPEKKLT
AAEFVDPRSEKLLRSRVEAIVRSEAPISAKLLSRRLLQSLGMTRLGPRAQKYLDEQLAAM
KLQTTEREGAVWYWHSGQDPDDYAGFRVSGAGDAKRDAADVPAQEAANALCEVLREQVAL
PEEDLLRETAKKLGYPRSGAGARNAAAAGLALASARGLAAPDRNGCWTLK
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacgaaccgcggcaatcacactggacgtgcagctgacgcccgtcgtcaactat
gcgcagcaacagaacggcctgcctctggcgcgccgcgtcgccgtgagcaatgacggcgac
gcggatctggaagatctggaagtgcgccttttcgcggcggaagattttgtcgagccggcc
aagttcggaatctcccggctcccggcgggcgagaccgcggagatcggcgacctcaaagtt
gcgctcagggccgagcgtctcgcgcagctgacggagcgcgtcgtcacgacgctcgcggcg
gaagtatggcagggagagaaacgtctggcttccgcggtgaaagaagtgaccttcctggcc
ttcgacgagtggcagggaagcggctactatcccgagctgctggcggccttcgtcaccccc
aaccatcccgagatcgcccgactcatgaagcgcgcttcgaagctgctggaagaatggacg
ggcagcccttcgttcgacgcctatcagacgcagaatcccaaccgcgtgctccggcaggcg
gccgctctgtacggcgcgattcaggagctgaacgtcgtctacgccgtgccgccggccagt
ttcgaggcggcggggcagcgcgtgcgcctctgcgacgcggtgacgggaacgtgcctgggc
acctgtcttgacctgacgctgctctacgcggcctgcctcgaggcggcgggactgtatccg
ctgcttctgctcaagaacgatcatattttcgccggcgtctggctggaagaaatgactttt
caggacgcggtcaaggacgatccggctctggtgagcaaacgcatggccgacggcatcggc
gagatcgccgtggtggagtgcaccggcgccgccgccggaaaaggaatgaccttcgacgaa
gcccgcgccgccgccgcggcggagatgggcgacgacaatccagtgcgttatgtcgtcgac
gtgcaccgagcccgcctggcgggaatccggccgctgccgctgcgcgtgcggaccgatcag
ggctggcgcgtggaggccgagtcgcgttccgccgcggagctgaccgccgcgccggaagaa
atggcggcgcgcgtccctgaaagcgccggacaatcggcggcgcagaaaccgctggacgcg
cgcggaaagaaaatcctgcagtgggaacgcaagctgctcgatctggggctgcgcaacacg
ctgctcaacctgcgcgcctccaagaatttgatccccgtgctggccgcgtcgctgccgcag
ctcgaagacgcgctttccgacggacggcagttcaccgtctcgccgcgcccgcaggagtgg
cgtctgcccgagggggcggcacgcagcctggaaccgccggccgagctgccgctttcccgc
ggactgctgcaatcggagtaccagaacgggcggctgcgctcgctgatgggcgaggctgag
ctgcagcgagccgtcaaagaactgtaccgcgccgccaaagtgtcgatcgaagaaaacggc
gccaacagcctgtatctgtcgatgggactgctgcgctggtacgaaaccgagcgcagcgaa
cgcccgcgctacgcgccgctggtcctgctgccggcggagctggtgcgcaaggccgccaac
aaaggctacggtctgcgcctgcgcgacgaggagccggtcatgaacgtgacgctgctggag
atgctcaagcagaacttcggcatcgtcgtcgacggactcgacccgctgccgtccgacgaa
cacggcgccgacgtcgtgcgcgtcttcaccgccgtgcgccgcgccgtgatgcagcagaaa
cgctgggacgtgatcgagtcggccttcgtgggcatcttctcgttctcgcgcttcgtgatg
tggaacgatatccgcaaccgcatggacgatctcgaaaagaacaaagtcgtgcgaagcctg
atggacggcaaactgagctgggaagccgcgcccatggagccgccgcgggaactcgatgag
accggactgctgctgccgctgccggtggactcgtcgcagctctacgccgtcaaggcggcc
gtggcgggcgaaacgttcgtgctgcacgggccgcccggcaccggtaagtcgcagaccatc
acgggactgatcgtcaacgcgctggcgcggggcaagactgtgctcttcgtcgccgagaag
atggcggcgctgtcggtcgtgcaggagcgcctgcgcaagctggggctcgacccgttctgc
ctcgaacttcattccaacaaagcccgcaaaaaagacgtgctcgagcagctgcgcgccgcc
gccgaagccggacgcgcgcagaaaaccccgatctacgcgcagaaggccgagcaggccgcc
cggctgcgcgccgagctggcggaatatccgcgccgtctgcacgaaaagcgcgtttcggga
ctttccgtttacgagatggtcaacgcctacgagccgctggccgacgccgacgacgccggc
atccgcctcgaatattcgcgtaccgccgcctggacggcagccgatttggaacgcaacgag
tcgctgctcggccgccttgccgccgccgcgcgggcggtcgggcgcccctgcggccatccg
ctgcggcttgtgacggaaacggagtactcgcagcgcttgcgcagccaactgccggcgctg
gccgaagattatcgggcgcgcctcgacgcttcggaacgcgcggcgcgggccttcgcggcg
cggctgggattgggcgcgccgcgtttgaaaaaggaatacgaccagcttcgcgacatcgcc
gttgagctggtccggtggcgggaaacgccgcgccgctgggcggcggaaaacgacgccgga
acgtatctgcgcggcgtgctggaaatggcggagcattaccgtgccgccgcggaaatcggc
ggcgaactgctgaaagaatatcgtccggcgtttttcgaacaggacggcaaggccctgcgc
ggcgagtgggacgagatcgagcggaaatggctgctgccgcgtctgttggccgagtcgggg
ttcgtgagaaaactttcgtcctacgcgctggcgccgcgcggcaaagaggacgcgcccggc
gatctcgaccggctgaacgcctatcgcgccgagctggcgcgtgcccagcagcttttgcgg
gaatacggccccggtctcgagtcgctcgaccgcggcggtgacacggactggcggcgcgtc
gatgaactggcgcggaacgccgcgcagagcgccgttcgccttgacgatctgagcggcgga
acggcgctgcggcagcgtcacgccgccgatcccgaatcgcagcgggccgccgcggaactg
ctgacgatctggcaggaactggagacgtcgcgcggcgcgctcgacgaattgctgcgcacg
gaaaatcctcccgacggcgacgattggctcgcggcgcagaaagatctctgcgccgcgctg
ctcgacaacgccgaagcgttgcgcgactggatcctctggaacagcctgtgcgaagaagcc
gtagcggccggactggggcccgtcgtctcggcctgccggaacgggctggcgcacgacaaa
gtgctgccggcgtaccgcaaggcctgcctgtgcaacctcatcgaggacgccgtcgacggc
gatcccgtgttgaaccgtttctccggcgcggtcttcggcgaaaaggtgtctcagatcaag
gaactgatcgacgaactggcgcggctggccagcgccgaggcctgcgccgttctggccgcc
cgggtgcccgatttcacgcgcgaagcctcgcagaactccgaactgggcatcttgcagcgc
gccatccgttccggcgggcgcaatctcagcatccgccgcctcttcgggcagctgcccaat
ctgctgccgcgcctgtgtccctgcatgctcatgagcccgatctcggccgcccagtacctc
gacccgcggcgcgagatgttcgacctcgtcgtcttcgacgaagcgtcgcagctcaccacc
agcaaagccgtcggcgcgctggcccgcggccgcgacgccgtgatcgtcggcgacccgaag
caaatgccgcccacgagctttttcatgaccaacctcgacgaccgcgaggaagaccccgaa
gtggccgacctcaccagcatcctcgacgactgtctggcgctcggcatgccggagacgcac
ctgctctggcactaccgcagccgccacgaaagcctgatcgccttcagcaacaaccggttc
tacgagaacaagctctacacgttcccgtcggcgaacgaccgcgtttcgaaggtgagtttc
gtcaagatcgacggcacgttcgaccgcggcggttccagaaccaaccgcgccgaggccgaa
gccgtcgtggccgaagtgatccgccgcgccaaagatccggcgcggcgccgcgaaagcgtc
ggcgtcgtcaccttcaacgtctcccagcagaatcttgtcgacgatctcttcgaagaggcc
cgcggccaggatcccgagctggaaaaatggtaccaggaatcggaggagccgttgttcatc
aaaaacctcgagaacgtgcagggcgacgagcgcgacgtgatcctgttctcgatcggcttc
ggcgccgaccgcgaagggcgcgtgagcatgaacttcggccccgtcaaccaggccggcggc
tggcggcggctcaacgtcgccgtgtcgcgttcgcgcgccgagatgatggtgttctcgtcg
ctggaacccgagcagatcgacctgacccgcaccgcgtccgagggcgtggcggcgctgaaa
gcctttttgcagtacgcgcgcagcggctatctgccgctgaaagcctccgccgcgggaacg
ggcgcgttgcgcgaacccgacggcgtcgccgccgagatctgtgcgcggctgaacgaacgc
ggctacgagacggcgcggcaggtcggacattccaaattccgcgtcgacatcggcgtcgtc
gatcccgatcagcccggcgagtacctgctgggcattctgctcgacggcggcgcctaccgc
gacgcccgcatggtgcgcgagcgcgagatctcccagatcggtgtgctcagcggcctgggc
tggacgatcgagcgcctctggaccatggactggtgggacaacaagaagcgcgagctcgac
cgcctgctgcgccgcatcgaagcgcgccgcgccgtccgccgcgaagagcgcgaggccaga
cgagccgccgaatccgaagcggccgctagcgccgctgccgctgaaagtgaagcgcccggc
gcggtcatggacggcggcggagacgtggagattccccgcgtccccgaccgcgccgcggct
gacggcaagccggaaccgagcagcgcgccagtttccgcgccgtctgccgcgcccgaaaaa
acgccgcggacggacgcccgaccgtaccgccccgcccagcttcccgagaaaaagctcacc
gcggccgagttcgtcgacccgcgcagcgaaaaattattgcgcagccgcgtcgaggccatc
gtgcgcagcgaagcgcccatttccgccaaactgctgagccgccgcctgctgcaaagcctc
ggcatgacccgtctcgggccgcgcgcgcaaaagtatctcgacgagcagctggcggcgatg
aaactgcaaacgaccgagcgcgagggcgccgtctggtactggcacagcgggcaggacccc
gacgactacgcgggattccgtgtcagcggcgccggcgacgccaaacgcgacgccgccgac
gtgcccgcgcaggaagctgcgaacgccctttgcgaagtgctgcgcgaacaggtcgccctg
cccgaggaagacctgctgcgcgaaacggcgaaaaaactcggctatccccgctccggagct
ggcgcgcgaaacgccgcggccgccgggctggctcttgcatccgcccgcggactggccgcg
ccggaccgcaacggctgctggacgctgaaatga
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