Pyramidobacter piscolens: CE91St28_05180
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Entry
CE91St28_05180 CDS
T08073
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppio
Pyramidobacter piscolens
Pathway
ppio03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CE91St28_05180 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppio03400
]
CE91St28_05180 (mutM)
Enzymes [BR:
ppio01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CE91St28_05180 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CE91St28_05180 (mutM)
DNA repair and recombination proteins [BR:
ppio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CE91St28_05180 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
zinc-ribbons_6
DZR
NFACT_N
zf-LITAF-like
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
BDF77724
LinkDB
All DBs
Position
571910..572794
Genome browser
AA seq
294 aa
AA seq
DB search
MPELPEVETVKNVTAPQIRGRRIEKVALERRDVIAHPAPDDFVRLVTGRAVTGMGRRGKF
LRFFLDDGAEMVLHLRMTGRLLVVPPEFPAEKHTRAVFSLSGRLQLRFADLRRFGRFWLL
QKGEKDCTGMDKLGPEPFDAGLTPVWLKERLGASRRAVKTCLLDQRVVAGIGNIYGDEIL
FAARIRPTRAASSLSRPEWERLTRAIREVMRFHVEQIDVSAEEFLRGRGTEYRNTPLLKV
YGRDGDPCPVCGATLQRAVVGGRSSVFCPRCQKRRETKVPSLRQGAAEKMKDVR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccggaggtcgaaacggtaaagaacgtgacggcgccgcaaatccgcgga
cgccgcatcgaaaaagtggcgctggaacgtcgcgacgtgatcgcccatccggcgccggac
gatttcgtcagactcgtgacgggacgtgcggtgacggggatgggacggcgcggcaaattc
ctgcgcttcttcctcgacgacggcgccgagatggtgttgcacctgcgcatgacagggcgg
ctgctggtcgtgccgccggaatttcccgcggagaagcacacgcgcgccgttttttcgctg
agcgggcgtctgcaactgcgctttgccgacctgcgccgcttcggccgcttctggctgctg
caaaagggcgagaaagactgcaccggcatggacaaactcggtccggagcccttcgacgcc
gggctgacacccgtctggctgaaagagcggctgggcgcttcccgacgtgccgtcaagacc
tgtttgctcgaccagcgcgtcgtcgccggcatcggcaacatttacggcgacgaaatcctt
ttcgccgcgcggatccggccgacgcgcgccgcgtcctcgctgagccgccccgaatgggag
cgcctgacgcgggcgatccgtgaggtgatgcgttttcacgtggagcagatcgacgtttcg
gcggaagaatttctgcgcggacgcggcacggaataccgcaacacgccgttgctgaaagtt
tacgggcgcgacggcgatccctgccccgtctgcggcgcgacgttgcagcgcgccgtcgtc
ggcggccgttccagcgtgttttgtccgcgctgccagaagcggagggaaacaaaagtgcct
tcgctgcggcaaggagcggcggaaaaaatgaaggacgttcgatga
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